Cyprinodon variegatus (sheepshead minnow): 107103394
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Entry
107103394 CDS
T06110
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1-like
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cvg01006
]
107103394
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107103394
Prenyltransferases [BR:
cvg01006
]
Protein prenylation
Rab geranylgeranyltransferase
107103394
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107103394
Endosome - Lysosome transport
Rab GTPases and associated proteins
107103394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
107103394
NCBI-ProteinID:
XP_015258573
Ensembl:
ENSCVAG00000019162
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MAAEELPSDFDIVILGTGLAESVVAAACSRVGQRVLHLDRRSHYAANWASFTFNGLLTWI
EEQKEESKPEKIEDWSSLVEEGEELIHLSNSDPASITNLQVFSYTSEEEEADEPNTIEEE
KAAGEDAVKESSETESAGSKEEEDAGPAEEEEPAETEEEEPEADQPPTSPPSNQSEPVRK
KISHAQLVKEGRRFNIDLVSKLLFSRGSLVDLLIKSNVSRYAEFKNVTRILTYRHGNIEQ
VPCSRADVFASRQLSVVEKRKLMRFLTSCMEETEEQTAYSGRPYSEFLRDQQLGESLQHF
LLHSIAMVTEDTPTEEGLASTRHFLRCLGRYGNTPFLFPVYGLGEIPQCFCRMSAVFGGI
YCLRHSVHCLIVDKDTNRCKAVIDSRGQRISCSHVVLEDSYLDADRKRTATPPRYLSRAV
LITDASVLPSDPDQQISMVTVPPTTTGGPSVKMVELSSSTMTCIPGTYLVHLTCQSVGSA
HEDLLPVVTRIFRTTEPQEEDRRPSVLWCLYFNMADGSALEVEGHRVPSNVYVCSGPDGA
LGHEHTIRQAESIFQKILPEEEFCPPAPNPEDIIYDGDNASPGEDRAAVENGGNQEENQE
KEGNQEENQEKEGNQEENQEENQEKEGNQENQEKKGDQEENGVNQEPEE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaggagctgccgtctgattttgacatcgtcattctgggcacaggtcttgct
gagtcggtggtagcagctgcctgttcgagggttggacaaagggttcttcacctggacagg
aggagtcattatgcagcgaactgggccagcttcacctttaacggcctgctcacctggatt
gaggagcagaaggaggagtctaagcctgagaagatcgaggattggtcgagtttagtggag
gaaggggaggagcttatacacctctcaaattcagaccccgcctccatcactaacctgcag
gtgtttagttacaccagtgaggaggaggaagctgatgaaccaaacaccatagaggaagaa
aaagcagcaggtgaagatgcagttaaagagtcgtcagagaccgagtctgcaggttcaaag
gaagaagaggatgctggacctgcagaggaagaggagcctgcagagacagaagaggaggag
cctgaggccgaccagccgccgacctcgcctccttccaaccaatcagagcccgtcagaaag
aagatcagccatgctcagctggtaaaggaggggcgcaggtttaacatcgacctggtctcc
aagctcctgttttctcgtggctctttggtcgatctgctcatcaaatcaaacgtgagtcgc
tacgctgagttcaagaacgtgaccaggatactgacctatcgccatggcaacatagagcag
gttccctgcagccgggctgatgtgtttgcgagccgccagctctctgtcgttgagaagagg
aagttgatgcgcttcctgacgtcatgtatggaggagacggaggagcagacggcctacagc
ggtcggccatattcggaattcctgcgtgaccaacagctcggtgaaagcctgcaacacttc
ctgcttcattctatcgccatggtaacggaagacacacccacagaggagggacttgcctcc
acacgtcacttccttcggtgtctgggtcgctatggcaacacccccttcctgtttcctgtt
tacggccttggagagatcccacagtgcttctgcaggatgagcgccgtgtttggagggatc
tactgtctcagacactccgtccactgtctcatcgtggacaaggacaccaacaggtgtaag
gcggtgattgacagccgaggccagcgaatcagctgcagccatgtggttctggaggacagt
tacctggacgcagacaggaagcggacagccacaccccccaggtatctgagccgggccgtc
ctcatcacagatgcctcggttctgccctcagacccggaccaacagatctccatggtaacg
gttcctcccaccacaacaggaggtccttcagtgaagatggtggagctgagctcgtccacc
atgacctgcatccctggaacatacttggtccatctcacctgccagtcggttggctccgcc
catgaggacctgttgcccgtggtaaccaggatattcagaaccacagagcctcaggaggaa
gaccgtcgtccctctgtcctctggtgtctgtacttcaacatggccgatgggtcagcgcta
gaggtcgaaggtcaccgcgtaccatccaacgtgtacgtctgctctggtccagatggagcg
ctgggacacgaacacaccatcagacaggctgagtccatcttccagaagatcctcccagag
gaggagttctgtcctcctgctccaaaccctgaagacatcatctatgatggagacaatgcg
tcccctggagaggacagagcagcagtggagaacggagggaaccaggaggagaaccaagag
aaagaaggaaaccaggaggagaaccaagagaaagaaggaaaccaggaggagaatcaggag
gagaaccaagagaaagaaggaaaccaggagaatcaggagaaaaaaggagaccaggaggag
aatggagtgaaccaagagcctgaggagtaa
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