Cyprinodon variegatus (sheepshead minnow): 107103472
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Entry
107103472 CDS
T06110
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04382
Cornified envelope formation
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107103472
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107103472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107103472
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Major cadherins
107103472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
DUF4625
Motif
Other DBs
NCBI-GeneID:
107103472
NCBI-ProteinID:
XP_015258677
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MPKVDLDESPKVRERATPPVETPQGQETQRLPSSNCLFPQVQAAVLVRSHSGVNLLRHKR
AWVIPPTILRENVDYTQKEYISRIRFDLPKGTKVRYELKGKGADQYPFHVFVVDEKGLVR
VTKVLDREQIPVYNITAFARREDGSALNENITLQLKVEDDNDNPPRFDSSMKAEVDECIP
EGTSVLQIKASDADDPETSNAQIAYSIIDQKPHDHFKMTKDGLIYVDYPHLDREEEDTYI
LTVTAADLYGAPGGHTTTGTVTITLNDVNDNPPTLEKSAYEGSIEENKFGVEVMRIKAQD
NDLDNTENWEAVFDIVKGNEDGYFSIKTDPKTNEGILVLEKAVDFEKVKTMDLGLVVRNK
APPFGSSGGGASGASGGGGASGASGGGGSSGGGGGSGGGSGGSSGTALKTYPIKINVKNQ
PDPPHFDSVAKAIPVTRNQPFSINNIVARYPAIDGDTGNPAKNVTYLKANDPLNWLSIDP
QTAEIKLTKDPYSDPSTRRLVNGTYFAEILCITDDMPAKTATGTIAIEVQPFNDHCPKLT
TDLMSMCTSENKLIVNAEDEDAFPFGAPFNFSIDPDGTQGSWQVKQHNETAAIVQAMEDL
WPGVYKLMFVVEDQQGKSCPESQKLKVSVCVCKDGDVCKKQTAPPAKLVGAGIGLLFLGL
LLLLLIPLLMCLCQCGSAAKYKDLFTDVPYSTKSHLIHYDTEPPADNVEAAALLTLPTQN
IKGGDLQYVEALPGAGFEMQQSVASMNQGMFQGVSSNGFRDEMGMNMWEGSGFGSETRES
RGYHDLALPDSFLSLYYIQKTSGDENVEITDTQLVYDYEGEGSPAGSVGCCSLLDSDNDL
SFLDDFGPRFKTLAEICGGKIVQSETTTQAETALPNVPVSNVRVSEPDLLTSQEVSHMSI
VQSANSRTEQRLASERREQSEIRESKAAVKEGMTSVQAGMAHQNQMVVLNQQQPVYFTTA
PMMQPMHYVVQQPLQNAVILAEAPASSLQHMVMVNGTDIASSQGVIVQGQTMMPNVQTQS
LGAVLVYSRVNQGTTGNLISGSQNMMFVESNVPAGSVRVLNGNQVSLAQGGATLNGLSGS
QTIIKKRESNSRGQQSQGGKGSFQKSEVSRGQKVHVISGASGGSEGSTSSYTLTTSTNNG
VVVGQKPRVMN
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggtggacctagatgagagccccaaggtccgggagcgcgccacccccccagtg
gaaaccccacagggccaggagacccagcgactgccttcatctaattgtttgtttccacag
gttcaggctgctgttttggtaagatctcattctggagtgaatctgctgcggcataaacga
gcgtgggttatccctcccaccatactgagggaaaatgtggactacacccaaaaggaatat
atttccaggatccgattcgatctaccaaagggaaccaaagtcaggtacgaattaaagggc
aaaggagcagatcaatatccattccatgtgttcgtggttgatgagaagggacttgttaga
gtgaccaaagtgcttgacagggagcagattcccgtctacaatatcacagcttttgccaga
cgcgaagatggcagcgcattaaatgagaatattacacttcaacttaaggttgaagatgac
aatgacaatcctcccaggtttgattcatcaatgaaagctgaggtggatgagtgcattcct
gaagggacttcagtcctacaaatcaaggccagtgatgcagatgatccagaaacatccaac
gctcagatcgcctactccatcatagaccagaaaccacatgaccattttaagatgaccaag
gatggcctgatctatgtcgattatcctcacttggatagagaagaagaagatacatacatt
ctaacagtgactgctgcagatctatacggcgcaccagggggacacactacaacaggcacc
gtcactatcacacttaacgatgtcaacgacaatcctccaactctggaaaaatctgcatat
gaaggaagcattgaagaaaacaaatttggtgttgaggtgatgaggatcaaagcacaggac
aacgacctcgacaacacggaaaactgggaggctgtttttgatattgtcaaagggaatgag
gatggatatttcagcataaaaactgatcccaaaaccaatgagggcatcttagtgcttgag
aaggctgtggactttgaaaaggtaaaaaccatggatctggggttagtagtacggaacaag
gctccaccgtttggatcctctggaggaggggctagtggggctagtgggggcggtggggct
agtggggctagtgggggcggtggaagcagtgggggtggtgggggcagtgggggtggatct
ggaggatccagtggaacagctttgaagacctatccaatcaaaatcaacgtgaagaaccag
ccggaccccccacattttgattcagttgccaaagctattccagtaacacgaaaccagccc
ttcagcattaataacattgttgcccgttatcctgcaatagatggagacactgggaatcca
gcaaagaatgttacgtatctgaaagccaacgaccccctcaactggcttagcattgacccc
cagacagctgagatcaaactgaccaaggacccttatagcgacccgtctacacgccgtctg
gtcaatgggacatattttgctgaaatactctgcatcacagacgatatgccggctaaaaca
gctactggcactatagccatcgaggtgcagccgttcaatgatcactgcccaaagctgacc
acagacttaatgtcgatgtgcacatcagagaacaagctgattgttaatgctgaagatgaa
gatgcatttccatttggagcaccttttaactttagcattgacccagacggcacacagggg
agctggcaggtgaagcaacacaatgagacggcagctattgtgcaggcgatggaggacctt
tggcctggtgtctacaaactgatgtttgtggtggaagaccaacagggaaagtcttgccca
gaatcacaaaaactgaaagttagtgtctgtgtctgtaaggatggggatgtctgcaagaaa
caaactgcacctcctgcgaagttagtaggtgcaggcattggccttctttttctgggactg
ctacttctacttttgattcctttgttgatgtgcctctgccagtgtggaagtgcggctaaa
tataaggacctctttactgatgtgccttattctacaaaatctcatctcattcactacgac
actgaaccccctgcagacaatgtggaagctgctgctttgctgaccttaccaacacagaat
ataaagggtggggatctacaatatgtagaagctctgccaggggctggatttgaaatgcag
caatcggtggcttccatgaatcagggcatgttccaaggtgtgtcctcaaatggcttcaga
gacgaaatggggatgaacatgtgggaaggcagtggctttgggtccgaaactcgagagtca
agaggatatcatgacttggctttaccagacagcttcctttcactctactacatccagaag
accagtggagatgagaacgttgagataacagatacccagctggtgtacgactatgagggc
gagggctcccctgctggctctgtgggatgctgcagtcttctggattcagacaatgacctg
agtttccttgatgattttggaccgaggtttaaaacgcttgctgaaatatgtggtggcaaa
atagtccaatctgagacgacgacacaagcggagactgctctacctaatgttcctgtgagc
aacgttcgagtgtcagagccagatttgttgaccagccaagaggtgtcccatatgtccatt
gtgcagtcggccaactccagaaccgagcagaggttagccagtgaaagaagggagcagtct
gagatcagggagagcaaggccgcagtgaaggaagggatgacctcagtgcaggcagggatg
gcgcaccagaaccagatggtagttctaaaccaacagcagcccgtctactttaccaccgcg
cctatgatgcagcccatgcactatgttgttcagcagccccttcagaatgcagtgatacta
gctgaggcacctgcctccagtcttcagcacatggtaatggttaatggcactgatatcgcc
tcatcccagggagttattgttcaaggtcagacaatgatgcccaatgtacaaacccagagc
cttggggcagtgctggtttacagcagggttaaccagggaaccactgggaacctgatctct
ggctcccaaaacatgatgtttgttgaaagcaatgtccctgctggatctgtgagagtacta
aacggtaaccaggttagccttgctcagggtggtgcgacactaaacgggttgtcaggatct
cagacaatcattaagaagcgggagtcaaacagcagagggcagcagagtcagggtggaaaa
ggttccttccaaaagtctgaagtctcgcgtggtcaaaaggttcatgtgatcagtggtgca
tccggcggctctgagggaagcacctcttcctacacccttactacatccaccaacaatgga
gtagttgttgggcagaagcccagagtaatgaactag
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integrated database retrieval system
