Cyprinodon variegatus (sheepshead minnow): 107103475
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Entry
107103475 CDS
T06110
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107103475
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
107103475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
107103475
NCBI-ProteinID:
XP_015258680
Ensembl:
ENSCVAG00000017344
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MLTELLAAGAKMADSDDEFDRRRRDKFRRERSDMERSREREDRRRDDWADRDWERGRERR
RDYDRGRRERFSPPRHISPQHKRMRRDWDEQRPDPYRYEPPYPGGGAPFQGAGPQAWHPD
FHLHPHPGLHPLQGRLGMMDPDLPPPGPPTMRSFKEFLLNMEDSVDETEAVKRYNQYKLD
FRRQQLQDFFLQHKEHEWFRSKYHPDDITARKAESLKALKTRLDVFLFLLDNSWLDGVSL
DMQHEAAIIKLLDAAVIKMEGGTDLDLQVLEAPAGGGVEAGGGEKSQTEPTDGTTAAQSG
SEPAVGQNEETGSAEGMKDAEKNHGGSRSPEEEKDEEEEEKKDEEEEKTVKKGRKRKRSL
SADSGEGSVSDSDSSHSDGEKEEEEEEGDEERQKEAPPKPRPLHLTTSLFIRSLPPDVSK
EEITALCRRFPGFLRVALSDPQPERRFFRRCWVTFDRSVNIKETCWNLQNIRLRDCELAP
VVNRDLSRRVRTVNGLTHHRPVVRNDIRLSARLIHSLDQRGELWSQQAETNPVLKNITDY
LIEEVSAEEEELIGASGGNAEENPASSDVPVETDEKLLKVLDRLLLYLRLVHSVDYYNFC
EYPAEDEMPHRCGLIHVRGPLPVAKITPTEVNEHLKMCEERLAPLFSPSETLSEEEAVRL
GKKNPEQEVEKFLASNTQELSKDKWLCPLSGKKFKAPEFVRKHILNKHGEKVTAVRQEVE
FFNNYLLDAKRPALPENKPLPLPTQAAPPGMAAFPGQSPQQQSLLGYPPGVRPPMPGFPG
LGPHLPPGQFGAGRGHYDNFRGGGFPGKQRSSRGMRGDPRSIIEYRDLDAPDDLDFF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctaacagagctgctagctgcaggagctaagatggccgacagcgatgacgagttcgac
cgcaggaggcgggacaagttccggagggagcgcagcgacatggagcggtccagagagcgg
gaggacaggaggagagacgactgggcggacagggactgggagcgcggcagagagaggagg
cgggactacgatcgggggcggagggagcgcttctcgccgccgcgccacatcagcccgcag
cacaagcgcatgaggagggactgggacgagcagcggcccgacccgtaccgctacgagccg
ccttacccggggggcggggctcccttccagggggcggggcctcaggcctggcatcctgac
ttccaccttcacccgcatcccggactgcaccccctgcagggcaggttggggatgatggat
ccagacctgcctccccccggcccccccaccatgaggagcttcaaggagttcctgctgaac
atggaggacagcgtggacgagacggaggccgtcaaacgctacaaccagtacaaactggac
ttccggcgccagcagctgcaggacttcttcctccagcacaaggagcacgagtggttccgg
tccaaataccaccccgatgacatcacggccaggaaggcggagtctctgaaggccctgaag
acccggctggacgtcttcctcttcctgctggacaacagctggctggacggcgtctctctg
gacatgcagcacgaggcggccatcatcaagctgctggatgccgctgtcataaagatggag
ggagggacggacctggacctgcaggtcctggaggctccagcagggggcggcgtggaagca
ggcggaggagagaagagccagacggagccgactgacggaactacggccgctcagagcggg
tcggaaccggctgtgggtcagaacgaggagacggggagcgctgaggggatgaaagacgct
gagaagaaccacggaggcagcaggagtccagaagaggagaaagacgaggaggaggaggag
aagaaggacgaagaggaggagaaaacggtgaagaagggcaggaagaggaaacggagcctg
tcggcggacagcggcgagggcagcgtctccgactctgactcctcccactctgacggagag
aaggaggaagaggaggaggaaggagatgaagagcgacagaaggaagctccgcccaagccc
cgcccactgcacctcaccacctccctgttcatcagaagcctccctccagacgtctccaag
gaggagatcacagcgttgtgtcgcaggttccccggcttcctgcgggtggcgctgtcagac
cctcagccagagagaaggttcttcaggaggtgctgggtgacgtttgatcgcagcgtgaac
atcaaggagacctgctggaaccttcagaacatccggctcagggactgtgagctggcgccg
gtggtgaaccgggacctgagccggcgggttcggaccgtcaacgggctgacccaccacagg
ccggtggtgaggaacgacatccggctgtcggcgcggctcatccacagcctggaccagagg
ggggagctgtggagccagcaggcggagaccaacccggttctaaagaacatcacagactac
ctcatcgaggaggtcagcgccgaggaggaggagctaatcggagcctcgggaggaaacgca
gaggaaaaccccgcctcctccgacgttcccgtggaaacggatgagaagctgctgaaggtc
ctggaccgcctgctgctctacctgcgcctcgttcactccgtggattactacaacttctgc
gagtatccggccgaggacgagatgccgcaccgctgcggcctgatccacgtacgaggaccg
ctgcccgtggccaagatcacgcccactgaggtgaacgaacacctgaagatgtgtgaggag
cgtctggctcctctgttctcaccgtctgagacgctcagtgaagaagaagctgttagactg
gggaagaagaacccggaacaagaggtggagaagttcctggcctccaacacccaggagctg
agcaaagacaagtggctgtgtcctctgagtgggaagaagttcaaggctccagagtttgtc
cgtaaacacatcctgaacaaacacggggaaaaggtcaccgccgtcagacaggaagtggag
ttttttaacaactacctgctggacgccaagagacccgccctccctgagaacaagcccctc
ccactaccgacacaagctgctcctcctgggatggcagcgtttcctggtcagtctccacag
cagcaaagccttctgggatatcctcctggagtcaggcctccgatgccgggtttcccaggt
ttgggaccccacctcccccctggccagtttggggcgggccgcggtcactatgacaacttc
agaggcggagggtttccagggaaacagaggagcagcaggggcatgagaggagacccccgc
tccatcatcgagtaccgggacctggacgcccctgatgacctggacttcttctag
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