Cyprinodon variegatus (sheepshead minnow): 107103572
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Entry
107103572 CDS
T06110
Symbol
pafah1b1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit alpha
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00565
Ether lipid metabolism
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
107103572 (pafah1b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107103572 (pafah1b1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107103572 (pafah1b1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107103572 (pafah1b1)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107103572 (pafah1b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
LisH
Beta-prop_RIG_2nd
LisH_PAC1
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR35_TULP_N
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
DUF2570
ARMC9_LisH
SutA-RBD
LisH_2
Motif
Other DBs
NCBI-GeneID:
107103572
NCBI-ProteinID:
XP_015258802
Ensembl:
ENSCVAG00000013369
UniProt:
A0A3Q2E6W5
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRNPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVANKECKAELREHEHVVECISWAPESANPTILDATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGILFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAAPFVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacaacggcaacgagatgaactaaatcgagcaatagccgattatctacga
tccaatggatatgaagaggcatattccactttcaagaaggaagcggaattagataataat
gaagaactggataagaagtatgcaggcctcttggaaaaaaagtggacctcagtcatcaga
ttacaaaagaaggtgatggagcttgaatcaaaactgaatgaagctaaagaagaaatcacc
ctgggcggacccgtcagtcagaagcgtgaccccaaagagtggatcccccgtccccctgaa
agatatgcgctgagcggccaccgcaatcctgtcacccgtgtcatcttccacccggtcttc
agcgtcatggtgtcggcctctgaggatgcaacaataaaggtgtgggactatgagacagga
gacttcgaacgcacactgaaaggccacacagattcagtgcaggacatctcgtttgaccag
actggcaagctgctggcatcctgctctgcagatatgaccatcaaactgtgggacttccaa
ggctttgagtgcatcaggaccatgcatggccatgaccacaatgtttcatctgtagccatc
atgcccaacggagatcacattgtttctgcctcgagggacaaaaccattaaaatgtgggag
gtggcaactggctactgtgtgaagacctttacgggccacagggagtgggttcgtatggtg
cgccccaaccaggacggcacgctgatcgccagctgctccaacgaccagaccgtccgtgtg
tgggtcgtggccaacaaagaatgcaaggccgagctgcgggagcacgaacacgtggtggag
tgcatctcatgggctccagagagcgcaaatcccaccatcctagacgccacaggctccgag
tccaagaagagtgggaagcccgggccattcctgctgtctggctccagggacaaaaccata
aagatgtgggatgtaagcactgggatgtgccttatgacactggttggacatgataactgg
gtgcgcggcatcctcttccatcccggaggcaagtttattgtgagctgtgctgatgataag
accttaaggatctgggactacaagaacaagcgctgcatgaagaccctgagtgcccacgaa
cactttgttacctctctggatttccacaaggctgctcccttcgtggtcactggcagcgta
gatcaaacagtaaaagtctgggagtgtcgttga
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integrated database retrieval system
