Cyprinodon variegatus (sheepshead minnow): 107103645
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Entry
107103645 CDS
T06110
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
cvg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107103645
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107103645
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107103645
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107103645
03036 Chromosome and associated proteins [BR:
cvg03036
]
107103645
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107103645
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107103645
SWI/SNF complex
107103645
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107103645
PBAF complex
107103645
SWI/SNF complex
107103645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
107103645
NCBI-ProteinID:
XP_015258909
Ensembl:
ENSCVAG00000011095
UniProt:
A0A3Q2CTR0
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLATVEERKKI
VESSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQPEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDS
LLEDQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaagcaaaacgtttggtcaaaaaccggtcaagtttcagctcgaagaggatgga
gaattttacatgattggttccgaggtggggaactacctgcgcatgttcagaggctccctc
tataaacggtatccttccttatggagaaaactggcaacagtggaagagcggaagaaaatt
gtggaatcatcacatgatcatggctacactcagctggccaccagtgttacgcttctgaag
gcctcagaggttgaggagatccttgaagggaacgatgagaagtataaagctgtgtctatc
agcacagagcctcccgcctacctcagggaacagaaagcaaagaggaacagtcagtgggtt
cccacgctgcccaacagttcccaccacctggacgcagtgccctgctccaccaccatcaac
cgcagccgactgggccgggacaagaagaggaccttccccctatgctttgatgaccacgat
cctgcggtgatccacgaaaacgccactcagccagaagttcttgtcccaatccgtctggac
atggagatcgagggccagaagctgagagatgccttcacctggaatatgaacgagaagctc
atgacgccagagatgtttgctgagatcctgtgcgacgacctggatctgaacccactggct
tttgtccctgccatcgcctccgccatccgacagcagatcgagtcctaccccacagacagc
ctcctggaggaccagacggaccagagggtgatcatcaagctgaacatccatgtggggaac
atctctctggtggaccagtttgaatgggacatgtctgagagggagaactctccagagaag
tttgccctgaagctgtgctctgaactcggactgggcggagagttcgtcaccaccatcgcc
tacagcatccggggtcagctgagctggcaccagaggacatacgccttcagcgagaacccc
ctccctactgtggagatcgccatcaggaacacgggtgatgctgaccagtggtgccccctg
ctggagaccctgaccgatgcagagatggagaagaagatcagagaccaggacagaaacaca
agacgaatgaggcgtctggcgaatacagcacctgcgtggtaa
DBGET
integrated database retrieval system
