KEGG   Cyprinodon variegatus (sheepshead minnow): 107103796
Entry
107103796         CDS       T06110                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat and FYVE domain-containing protein 1-like
  KO
K23299  WD repeat and FYVE domain-containing protein 1
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107103796
Membrane trafficking [BR:cvg04131]
 Autophagy
  Other autophagy associated proteins
   Others
    107103796
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 FYVE WD40_CDC20-Fz WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_IFT122_1st UNC-79
Other DBs
NCBI-GeneID: 107103796
NCBI-ProteinID: XP_015259109
LinkDB
Position
Unknown
AA seq 347 aa
MAAEIHSRPQAARPVLLNKIEGHSDTVNAAVLIPKEDGVITVSEDRTIRVWLKRDSGQYW
PSIFHTVSSPCSSMSYHHDSRRIFIGQDNGAVVEFLISEDFNKMNHVKTYPGXGQVGDVL
LDLGDRWGMSCWTWGTGSIGALWWDPVQRLLFSGASDHSIIMWDIGGRKGRTLLLQGHHE
RVQALRFLQFTRQLLSCSADGGIAVWNMDARREEAPQWLDSDSCQKCEQPFFWNIKQMWD
TKTLGLRQHHCRKCGKAVCGKCSSKRSTFPIMGFEFPVRVCDACFDSIKEEDRAPLATFH
EGKHSIARMDMDPSRGLMVTCGSDRIVKIWDMTQVVGSGLATGFSPR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggcggcagagatccactccaggccccaggcggctcggccggtcctcctcaacaagatc
gagggacactcggacaccgtcaacgcggccgttttgataccgaaggaggacggagtgatc
acggtcagcgaggacagaaccatccgggtgtggctgaaaagggacagcggtcagtactgg
cccagcatcttccacacagtgtcctcgccgtgttccagcatgtcctaccatcatgacagc
aggcgcatcttcataggccaggacaacggggcggtggtggagtttctcatctctgaagat
ttcaacaagatgaaccacgttaaaacctacccaggtngaggacaggtgggggacgtcctg
ctggacctgggggacaggtgggggatgtcctgctggacctgggggacaggaagcatagga
gccctgtggtgggacccggtccaaaggctgctgttctcaggggcctcggaccacagcatc
atcatgtgggacatcgggggccggaagggacggactctgcttctccagggacatcacgag
cgcgtccaggcgctgcgtttcctccagttcaccaggcagctgctgtcctgctcggccgac
ggcggcatcgcggtgtggaacatggacgcccgcagagaggaggcgccgcagtggttggac
agcgactcctgtcagaagtgtgagcagccattcttctggaacatcaagcagatgtgggac
actaagaccctgggactgagacagcaccactgcaggaagtgtgggaaggcggtgtgcggg
aaatgcagctccaaacgctccaccttcccaatcatgggcttcgagttcccggtgcgcgtg
tgcgacgcctgcttcgactccatcaaagaggaagatcgggcgccgctggccaccttccac
gaggggaaacacagcatcgcccgcatggacatggacccgtccagaggcctgatggtcacg
tgtggaagcgaccgcatcgttaagatctgggacatgacacaggtggtcggcagtggctta
gcaacaggcttctccccgcgctga

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