Cyprinodon variegatus (sheepshead minnow): 107103861
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Entry
107103861 CDS
T06110
Name
(RefSeq) desmin-like
KO
K07610
desmin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107103861
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107103861
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
107103861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
GAS
DUF7491
DUF4200
KASH_CCD
ABATE
CENP-F_leu_zip
DUF1664
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
107103861
NCBI-ProteinID:
XP_015259189
Ensembl:
ENSCVAG00000003623
UniProt:
A0A3Q2CCF5
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MSKSYASSAQSASSYRRTFGSGVGSSPMSSLYSSGGGRSSASSHMSSRVYEVKSTAVPSF
SSFRAGGAGFGSSTAMRTYSGEKLDFNLADAMNQDFLNTRTNEKAELQHLNDRFASYIEK
VRFLEQQNAALTMEIEKLRVREGPGRVAELYEEEMRELRRQIEALTNQRARVEVERDNLA
DDLQKLKLRLQEEIHQKEEAENNLSAFRADVDSATLARLDLERRIESLQEEIAFLKKIHE
EEIRELQNQMQDTQVQVQMDMSKPDLTAALRDIRMQYEAIAAKNIAEAEEWYKSKVSDLN
QAVNKNNDALRQAKQETMEYRHQIQSYTCEIDSLKGTNESLLRQMREMEDRMGREASGFQ
DTISKLEADIAKMKDDMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTTMPVQS
AYSSIGFRETSPESQRGSEVHSKKTVVIKTIETRDGEVVSESTQHQQDIM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcctacgcctcctcagcccagagcgcctcatcctaccgccgaacctttggt
tctggtgttggttcatcaccaatgtcatccctctattcctcaggaggaggtcgaagctct
gcttccagtcatatgtcttccagagtctatgaggtcaagagtaccgctgtcccctccttc
tccagcttcagagccgggggagcaggattcggttcctctacagccatgcgtacctacagt
ggtgagaagctcgacttcaacctagcagatgccatgaaccaagacttcctcaacacaagg
accaatgagaaggccgaacttcagcacctcaatgaccgctttgccagctacatcgagaag
gtacgattcctggagcagcagaatgctgcattgaccatggagattgagaagctgagggtt
cgagaggggcctggccgtgtggctgagctgtacgaggaggaaatgagggagctgaggagg
cagattgaggccctcaccaaccaacgtgccagggtggaagtagagagggacaacctagca
gatgatctgcagaaactaaagctcagacttcaagaagagattcaccagaaggaagaggct
gagaacaacctgtctgcatttagagctgatgttgacagtgcaactctggccaggctggac
ctggagagacgcatagagagcttgcaggaggagattgccttcctcaagaaaatccatgag
gaggagatcagagagctgcagaaccagatgcaggacactcaggtccaggtccagatggac
atgtccaagcctgacctgactgctgccctcagggacatccgcatgcagtacgaagccatc
gctgcaaagaacattgcagaggctgaagaatggtacaagtctaaggtgtctgatctgaac
caagctgtgaacaagaacaacgatgctctgcgccaggccaagcaggaaaccatggaatac
cgtcaccagatccagtcctacacctgtgaaattgactctcttaagggcaccaacgagtct
ctgctgcgccagatgagggaaatggaggatcggatgggccgagaagcctccggtttccag
gataccatttcaaagctggaggcagacattgccaagatgaaggatgatatggctcgccac
ctgagggagtaccaggatctcctcaatgtgaagatggcccttgacattgaaattgccacc
tatcgcaagttgctggagggagaggagagcaggatcaccaccaccatgcctgtccagtct
gcctattcctccattggattcagagagaccagtcctgagtcccagcgaggatctgaggtt
cactccaagaaaactgttgtcatcaagacgattgagacccgtgatggagaggtcgtcagc
gagtcaacacagcatcagcaggacatcatgtaa
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