Cyprinodon variegatus (sheepshead minnow): 107103873
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Entry
107103873 CDS
T06110
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04141
Protein processing in endoplasmic reticulum
cvg04210
Apoptosis
cvg04217
Necroptosis
cvg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107103873
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107103873
04217 Necroptosis
107103873
04218 Cellular senescence
107103873
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107103873
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
107103873
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C2: calpain family
107103873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
107103873
NCBI-ProteinID:
XP_015259202
Ensembl:
ENSCVAG00000003411
UniProt:
A0A3Q2DRA6
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MVEAPIYATGMAAKLRSQWDREQGLGQNDNAVKFLGQNYESLKAQCLRSGKLFEDSMFPC
TTSSLGYDELGPRSSKTSGVRWMRPTELCRRPEFIVDGATRTDICQGALGDCWLLAAIAS
LTLNDNLLHRVVPHGQSFQQGYAGIFHFQFWQFGEWVEVVIDDRLPVKDGKLLFVHSAEG
TEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELRKAPSDLYSIISRAIE
RGSLLGCSIDITSALDMEAVTFKKLVKGHAYSVTAVEEVVYRGNLTKLVRIRNPWGEVEW
TGPWSDDSREWDSVDRSVRAKLQNRSEDGEFWMSFSDFLREFTRLEICNLTADALQHSQM
KKWNTSLFGGEWRRGSTAGGCRNYPATFWLNPQFKIMLQHPDTPGKPDCSFLVALMQKDR
RKKRREGKDMETIGFALYEVPDQYAGSSGVHLKRDFFLTHASSARSEQFINLREVSSRLQ
LPVGEYIIVPSTFEPNKEGDFVLRVFSEKPAGSEELDDKVVANLPEEPTVDESRIDASFK
NLFRQLAGPDMEISLNELQTILNRIISKHQDLKTDGFSKEACRSMINLMDVDGSGKLGLT
EFHVLWEKIRRYLTIYRQFDLDKSGTMNSYEMRMALESAGFKLNNHLFQLIILRYTEEDM
NIDFDNFVTCLVRLETMFKTFKNMDTDGDGEISLNFFQWITLTMFA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggctccaatttatgccacaggcatggccgccaagctcaggagtcagtgggat
cgagagcaaggcctcggacagaacgacaacgccgtgaagtttctgggtcagaactacgag
tctcttaaagcgcagtgcctccggagcgggaagctgtttgaggacagcatgttcccctgc
accacgtcgtctctgggatacgacgagctcggacccaggtcctccaagaccagcggagta
cgctggatgaggcccacggagttatgcaggcggccggagttcattgtagacggagcaact
cgcacagacatctgtcagggagctctgggagactgctggctgctggcagccatcgcctca
ctgaccctcaatgataacctcctccatagagtggtccctcatggacagagcttccagcag
ggatatgcaggcatcttccacttccagttctggcagtttggagaatgggtggaggtggtg
atcgacgaccgtctaccagtgaaagacgggaagttgctgtttgtccattctgcagagggg
acagagttctggagcgctctcctggaaaaggcctacgccaaattaaatggctgttatgag
gcgctgtcaggtgggagcacgtcagagggctttgaggacttcaccggtggagtgacggag
atgtttgagctgagaaaagcgccttcggacctctacagcatcatcagccgagccattgag
agaggatccctgcttggctgctcaattgatatcaccagtgcattagacatggaggccgtc
acatttaagaagctggtgaaaggccacgcctactcggtgactgctgtggaagaggtggtg
tacagaggaaatctgaccaagctggttcgcatcagaaacccctggggggaggtggaatgg
accgggccctggagtgatgactccagagagtgggactccgtggatcgctcagtcagggct
aaacttcagaaccgcagtgaagatggggaattctggatgtccttcagtgactttctacga
gagttcacccgtctggagatctgcaacctgacggcggacgccctgcagcacagccagatg
aagaaatggaacacgtcgctcttcgggggagagtggaggagaggcagcacggccggaggc
tgcaggaactacccagcaacattttggttgaatcctcagtttaagatcatgctacagcac
ccagacacccccggcaagccagactgtagctttctggtcgccctcatgcaaaaagaccgc
aggaagaagagacgagaaggcaaagatatggagaccatcgggtttgctctgtatgaggtt
ccagatcagtatgcggggagctcgggggtccacctgaagcgggacttcttcctcactcac
gcctccagcgctcgatcggagcagttcatcaacctgagggaggtcagctcgcgcttgcag
ttgccggtcggggagtacatcatcgtcccctctacctttgagcccaataaagaaggagac
tttgtgctgagggtgttctctgaaaaacctgctggttctgaggagcttgatgataaagtc
gttgcaaaccttcctgaagagcctacagttgatgagagccggattgatgccagcttcaag
aatctcttccggcagctggcaggacctgacatggagatcagcctcaatgaacttcagacc
atcctgaacaggatcatatccaaacatcaggacctgaagacagatggcttttctaaagaa
gcttgtcgcagtatgataaacctcatggacgtggacggaagcgggaagcttgggttgacg
gagttccatgttctctgggaaaaaatccgacgatacctgactatatacagacagtttgat
ttggacaaatcaggcaccatgaactcctatgagatgcggatggcccttgaatctgcaggt
ttcaagctgaataaccacctgttccagctgatcatcctgcgctataccgaggaagacatg
aatatcgactttgacaattttgtcacatgtttggtccgcctggagaccatgttcaaaacg
tttaaaaacatggacacggatggggacggggaaatatccctcaacttctttcagtggatt
accctgaccatgtttgcctag
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