Cyprinodon variegatus (sheepshead minnow): 107103877
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Entry
107103877 CDS
T06110
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107103877 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107103877 (usp38)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107103877 (usp38)
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107103877 (usp38)
Ubiquitin system [BR:
cvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107103877 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107103877
NCBI-ProteinID:
XP_015259214
Ensembl:
ENSCVAG00000003259
UniProt:
A0A3Q2FFC3
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MDKILEGLISSDHSAPVKRAIVKKVVEAAENDVTEEQCRALFTLTTRLILLGDDPFQKQI
GLQVLEAYARYHRPEFELFFSKDFVLSLLQQGYGELKHGDPAIVDYIHCCLRLLISCPSV
LDTFSVIKVEVLRMVCERPEPALCVRISSLLSDFMQCIPRDKSGILFCQQLVRTISCFQC
VASEERELREYVSQVTKVSTLLQNIWKAEPDTLLLSLQEVFAIISSTDPSFDPSIALASL
VQHIPVQMITVLIKSLTTDQNVKDATMTKALCRMIDWLSWPLAQHVDTWVIALLRGLAAV
QKFTILIDVTLLKIELVFNRLWYPLVRQGALAVLSHMLLSFQHSPEAFHLIVPHVVPLVK
SLNSDGLPTSQAFLLQFTELIHCMMYQYSGFPDLYDHILEAIKELPKPSEEKIKLVLNQS
AWTSQSNSFASGLLRPAGKSETGKTGLINLGNTCYMNSIIQTLFMATDFRRHVLSLNLNG
CNTLMKKLQLLFAFLAHTQRAAYAPRNFLEASRPPWFNVGSQQDCSEYLRFLLERLHEEE
KTLHVLQSAKPKVVSLANTISRDPTSPASSKEPQDSDLVEAENQSADDGRTLIERMFGGK
LITGIRCMQCNCISEKEEPFTDLSLAFCPSASSQGSPKAERPSEEAKLLCQGSVNGGSEA
PESGSASSAAPNIQYEPVMTTEPPLAVPDLVNYFLAPEILDEDNAYFCETCISLQRAERT
MKVVSAPKYLILTLLRFSYDAKSHIRKKILDSVIIPPALRLPVYAASTPVHCSSTNSSPL
QVDSPESSENLAKKLKSSQEEEEEGKVKMDEAEVSEGSETWVQSVPYMLSSVVVHSGISS
ESGHYYSYGRNINGADGMQCPGGLPPTSDDSANGQAASSLCTSEQADVSAPSGLEAKDWL
LFNDSKVTFTSLQSVQNITNRFPKDTAYVLMYRKQELPGSGRNEGQTANGMRASAEPPLQ
KELLDAIIEDNKLFLQEQELSARTQALQAASSSCSFRPNGSDDNNPPGSCGPSGGGGGGG
GGFNTISRLVF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctggagggcctgatcagctcggaccactctgctccggtaaagagggcc
atagtgaagaaggtggtggaagcagcagagaacgatgtgacggaggagcagtgtcgagcg
ctgttcacactcaccacccgcctcatcctgctcggtgacgaccctttccagaagcagatt
ggcctgcaggtcctggaggcctatgcccgctaccaccgcccagagttcgagctctttttc
agcaaagactttgtgctcagtttgctccagcagggctacggggagcttaaacacggagac
cccgccattgtcgactacatccactgctgcctgcggctgctcatcagctgcccctctgta
ctggacaccttcagcgtgatcaaggtggaggttttgaggatggtgtgtgagcgccctgag
ccggctctctgcgtacggatcagctctttgctgtcagactttatgcagtgcatcccgagg
gacaagtcgggcattttgttctgtcagcagctggtgaggactatcagctgctttcagtgc
gttgccagcgaggagcgggaactaagagagtatgtgagccaggtgacaaaggtcagcacc
ctgctgcagaacatctggaaggctgagcctgacacattgctgctctctttgcaggaggtc
ttcgccatcatctcctccacagacccatcctttgacccgtctattgctctggctagtctg
gtccagcatatccccgtgcagatgatcactgtgctcatcaagagtctcaccacagaccag
aacgtcaaagatgcgacgatgaccaaagctctctgcagaatgatcgactggttgtcctgg
cctctggcccagcatgtggacacctgggtcatcgctctgctcaggggcctggctgcagtt
cagaagttcaccatcctcatagatgtcactctgctgaaaatcgaactggtctttaaccgt
ctgtggtaccctctcgtacggcagggtgcgctagccgtgctctcccatatgctgctgagc
ttccagcactctccagaggccttccatttgattgttccacatgtggtgcctctggttaag
tctctaaactcagacggcctcccgaccagtcaggcgttccttctgcagttcaccgagctg
atccactgcatgatgtatcagtactctggtttcccggacctctacgaccacatattggaa
gccataaaggagcttccaaaaccctcagaagagaagatcaaattggtgttgaatcaaagt
gcctggacatcccagtcgaattcatttgcttctgggttactgaggccagctgggaagtct
gagactggaaagacgggcctgatcaacctggggaacacctgctacatgaacagcatcatc
cagactctttttatggcaactgacttcaggaggcacgttctgtctttaaatctaaacggc
tgcaacacgctgatgaagaagctccagctcctcttcgccttcctggctcacacacagagg
gcagcatacgctcccagaaacttcttggaagcatctcgtcctccctggttcaacgtgggc
tcacagcaggactgctcagagtatctgagatttcttctagaaaggttacatgaagaggag
aaaacgcttcacgtcctgcagtcagccaagccaaaggttgtctccttggccaacaccata
agcagagacccaacaagtccagcatcttccaaagagccccaggactctgatttggtcgag
gcagagaaccagtctgcagacgatgggaggactttaatagaacggatgtttggtggaaag
ctgatcacaggcatccgctgtatgcaatgcaactgcatctctgagaaagaagagcctttt
acggacctgtctttggccttttgtccttcagcctcctcccagggcagccctaaagcagag
agaccttcagaggaggccaagctgctctgtcagggatctgtcaatggtggcagtgaagcc
ccagaatcaggctcagccagcagcgcagctcctaacattcaatatgagccagtgatgact
actgagccccctctcgcagtgccggacctggtgaactattttctggctcctgagatcctc
gacgaagacaacgcttacttttgtgagacgtgcatttccctccaacgagctgagaggact
atgaaagtagtctctgcacccaagtacctcattctcacattgctgcggttctcttacgat
gccaaaagccatatccgtaagaagattctagacagcgtcatcatcccaccagctctgaga
cttcctgtttatgccgcttcaacacctgtgcactgctcctctaccaactcatctcccctg
caagttgattctcctgagagcagcgagaacctggctaagaaactcaaatcatcacaagaa
gaggaagaggagggaaaagtgaagatggatgaggctgaggtgagcgaaggtagtgaaacc
tgggtccagtctgtgccctatatgctgagctccgtagtggtgcattctggtatatcatca
gagagcggccactactattcctacggccgaaacatcaatggagcagatgggatgcagtgt
ccagggggcctccctcccacctcagacgattcagccaatggccaagctgccagcagtctc
tgcacgtctgaacaagctgacgtctccgctcccagcggcctggaggcaaaggactggctc
ctgttcaatgacagcaaagtgacgttcacctccctacagtcggtccagaacatcaccaac
cgcttccccaaggacacggcgtatgtgctcatgtacaggaaacaggagctgccagggtcc
ggccgaaacgagggacaaacggcaaatggaatgagagcgagcgctgagccccccctgcaa
aaagagctgctggacgctattatcgaagacaacaagctgttcctacaggagcaggagctc
agcgctcggacccaagctctgcaggccgcctcctcttcatgctccttccgaccaaacggc
tcagatgacaacaacccaccagggagctgtggcccatctggaggagggggaggaggtggg
ggaggcttcaacactatcagcagactggtgttctga
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