Cyprinodon variegatus (sheepshead minnow): 107104047
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Entry
107104047 CDS
T06110
Symbol
lmna
Name
(RefSeq) lamin isoform X1
KO
K12641
lamin A/C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04210
Apoptosis
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107104047 (lmna)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107104047 (lmna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107104047 (lmna)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
107104047 (lmna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
LTD
GBR2_CC
Crescentin
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
107104047
NCBI-ProteinID:
XP_015259442
Ensembl:
ENSCVAG00000020062
UniProt:
A0A3Q2EGX0
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
METPSQKRPRGAVSPARITRLQEKEELCNLNDRLAIYIDKVRSLESENASLRMRITESES
EVTRDLSGIKSAYETELADARKTLDVVAKERARLQLELGKIREEHKELKARNAKKESDLE
AALLRLKDLEAMLNSKDAAYTTALSEKRNVEAELKELKAQLAKVEGSLADTRKQLQDEML
RRVDAENRLQTLREEQEFQKNIYNEELREARRRHSSQIVEIDGGRQQEFESKLAEALSEL
RAQHEDQVRIYKEELERTYNSKLENARQSAERNSHMVGATHEELQQTRVRMEGMTTQLTQ
LQKQLSSSEARVRELEEALARERDMMRRRLEDKEREMAAIRARMQQQLDDYQELLDIKLA
LDMEINAYRKLLEGEEERLRLSPSPSSSKVTVTRTSGSSHTSRLLPSFGSAVASSSRTSS
SASKKRRRDDDSETSSMVGGTVTKTRISQQASASGRITVDEVDLDGKYIRLSNKADEDQS
LGNWELKRQVGSSTPIVYKFPSKFTLKAGASVTVWAASGGGTHNPPNHLVWKSQASWGTG
DLLQTTLISAGGEEMATRNVTRTLFQDADAEDDDMGAHSTSGGEHEYNLRSRTVVCDSCG
QPSERSGGLEGLGGRTSFMGTNEPRQGRMKPENCSVM
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcccagccagaagcggccccgcggcgccgtatcgccggcgcgcatcaccagg
ctgcaggagaaggaggagctgtgcaaccttaatgaccgcctggccatctacatcgacaag
gttcgctccctggagtcggagaacgcctcgctccggatgcgcatcaccgagtccgagtcc
gaggtcacccgcgacctgtcgggcatcaagtcggcctacgagacggagctggccgacgcc
cggaagaccctggacgtggtggccaaggagcgggcgcggctgcagctggagctgggaaag
atcagggaggagcacaaggagctgaaggccaggaacgccaagaaggagtcagacctggaa
gccgccctgctgcggctgaaggacctggaggccatgctgaactccaaagatgctgcctac
accaccgccctgagcgagaagcggaacgtggaggccgagctgaaggagctgaaggcccag
ctggccaaggtggaaggtagcctggccgacacccggaagcagctgcaggatgagatgctg
aggagggtggatgctgaaaaccgtctccagaccctgagggaggagcaggagttccagaag
aacatctacaatgaggagctgcgtgaggccagacgtcggcacagttcccagatagtggag
atcgacggcgggaggcagcaggagtttgaaagcaaactggctgaagctctgtctgagctg
agggcgcagcatgaggaccaggttcgcatctacaaggaggagctggagaggacctacaac
tccaagctggaaaatgcccgtcagtcagcggagagaaacagccacatggtcggcgccacc
catgaggagctgcagcagacccgcgtccgtatggagggcatgaccacccagctgacccag
ctgcagaagcagctgtcgtccagcgaggcccgagtacgggagctggaagaggctctggcc
cgggagcgagacatgatgcggcgccgcctggaggacaaggagcgggagatggcggcgatc
cgagcccggatgcagcagcagctggacgactaccaggagctgctggacatcaagctggct
ctggacatggagatcaacgcctacaggaagctgctggagggcgaggaggagaggctccgt
ctgtcccccagtccctcgtcctccaaggtgacggtgactcggacctccggatcaagccac
accagccgcctgctcccctcttttggttccgccgtggcttccagcagccgcacctcatcc
agcgccagcaagaagcggcgccgggacgacgacagtgagacctccagcatggtgggtggt
actgtgacaaagacccgcatcagccagcaggcctctgccagcggacgcatcacagtggac
gaagtggacctggacgggaagtacatccgtctgagcaacaaggctgatgaggaccagtct
ctgggcaactgggagctgaagagacaagttggaagctccactcccatcgtctataagttt
cccagcaagttcaccctgaaggctggagcctcagtgacggtctgggctgcctctggtggg
ggaacccacaacccccccaaccacctggtctggaagagccaggcctcctggggaaccgga
gacctgctgcagaccaccctgatcagcgccggaggagaggaaatggctaccaggaatgtg
acgcgtaccttgttccaggatgccgatgcagaggatgatgacatgggagctcacagcact
agcggcggcgagcacgagtacaacctgcgcagccgcaccgtagtgtgcgactcatgtgga
caaccatcagaacgctccggcggactggaaggccttgggggacgaacctccttcatggga
accaacgagcccagacagggtcgcatgaagccggagaactgctccgtcatgtaa
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