Cyprinodon variegatus (sheepshead minnow): 107104085
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Entry
107104085 CDS
T06110
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107104085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107104085
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107104085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
107104085
NCBI-ProteinID:
XP_015259488
Ensembl:
ENSCVAG00000019305
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MSNGGKDQKDKKKPETDSGDEKGGLDWLLENSNSETSPVPMDSNVLLSRPKAPSDNIFGT
AFTRDKVFKAASQGDAAQLIGLLDYLQVNDKRLTSPDFVGKDKSNGKTALLKALLNLKDG
KNNTIEVLIDVADKTQDLKGLINAAYTDNSYKGQTALHIAIERRSFDYVKLLVQRGADVQ
AKANGTFFQRNTRLGFYFGELPLSLAACTNQPEIVSFLMENPYRRADPTDKDSQGNTVLH
TLVVIADDTTENTELVANMYDKILVQHYKLNEDSNIQLELIENNEGLTPLKLAAKLGKIG
LFKHILNREFMDEERRPLSRKFTEWVYGPVHSSLYDMSSIDTNEKNSVLEIIIFGSEVPK
RTEMLRIEPLRSLLQDKWNRFASKLFLMNFIFYSMYLAIFTTVAFYRKDGKPPFPVENNP
VDHLRCIGELISVLGAVRFFYKTITIFKRNPPRIRALFTDGYSEFLFFLQAILLLVCAIL
YCCGRREYVGLLVLSLALAWINVLYYTRGSKQLGIYNVMMQRMILGDLLHFLMVYIVLLF
GFSAAVCTLIDDSTEQSNGTFPRGRTFNVETFTCEKPTYNDIRFTTLELFKFTIGMGDLE
FTDHVQYKEVFYILLICYIVLTYILMLNMLIALMGNTVERTSEQSEPIWNLQRAFTILEM
ERTLPRWLRSRLHSRDSDMVCFKSDEGKSRRFVRVTVMNWKKWRSDLGVELKEDPANVER
DEESSGNPWNLNVLLRNIRSRRHRQQENYIL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatggaggaaaagaccaaaaggacaaaaagaagccagaaacagactcaggggat
gagaaagggggtcttgattggcttcttgaaaactccaactcagagactagtcctgtgccg
atggacagcaatgttttactatcaagacctaaggccccttctgacaacatctttggtacg
gcgttcacaagggacaaagtattcaaagcagcatctcagggggacgctgcacagcttatc
ggcctgcttgactacctgcaagttaatgataagcgacttaccagcccagactttgtaggc
aaagataaatcaaatggaaaaacagcactcttgaaagctttgctgaacctgaaagatggg
aaaaataacaccattgaagtcctgattgacgtagcagacaagactcaggacctaaaaggt
ttaatcaacgcagcgtatacagacaatagttataagggtcagacagccttgcatatcgcc
attgaaagaaggagctttgattacgtaaagctgttagtccagagaggagcggatgtccaa
gcaaaagccaatggaacattttttcagcgtaacactaggcttggattttattttggtgag
ctgcctttgtccttggctgcctgcaccaatcagccagaaatagtttcatttctcatggaa
aacccttataggagagccgatccgactgataaagactcacaaggaaacactgttttgcac
actctggtggtgatagcagatgacacaacagaaaacacagaacttgttgcaaacatgtat
gacaaaatccttgttcagcactacaagcttaacgaagacagcaacatccagctggaattg
attgagaacaacgaaggtctcacaccgcttaaactagctgccaaactcggaaagattggg
ctttttaagcacatattaaacagagaatttatggatgaggaaagacgaccgctgtccaga
aagttcacagaatgggtctatggacctgttcactcttctctttatgacatgagttccatc
gacaccaatgaaaaaaactctgtgctggagattatcatctttgggagcgaagttcctaaa
cgcacagaaatgctgaggatcgaacctctacgcagtcttcttcaggataaatggaataga
tttgcttccaagttatttttgatgaacttcatattttattcaatgtatctggccattttc
accacagtggccttctacagaaaagacggaaagccacccttcccagtggaaaacaaccca
gttgaccacctccgttgtattggtgagctcatcagtgtccttggagcagtaaggtttttc
tataaaactataactattttcaagaggaaccctccaagaataagggctctctttactgat
ggatacagtgaatttctatttttcctgcaggcaatcctccttctggtctgtgcaatcttg
tactgctgtggacggagggaatacgtcgggctccttgtgctgtctttagcccttgcctgg
attaatgttttgtattacacaaggggttcgaagcagctggggatctacaacgtcatgatg
caaaggatgatcctgggtgaccttctacactttttaatggtctacattgtcctgcttttt
ggattttctgccgctgtttgtaccctgattgacgactcaactgaacaaagcaatggaaca
tttcccagaggaaggaccttcaatgttgaaacattcacatgcgagaaaccgacttataat
gatatccgttttaccacactggaactgttcaaattcacaattggaatgggggatctagaa
ttcactgaccacgttcagtacaaagaagttttctacatcctgctcatctgctatatcgtc
ctcacttatattctgatgctaaacatgctcatcgctctgatgggcaacacggtggagaga
acttcagaacaaagtgaacccatctggaacctgcagagagcttttaccattttggagatg
gagaggactctgccacggtggctgaggtcaaggctgcactccagagattcagacatggtg
tgcttcaaaagcgacgagggcaagtctcgtagatttgtcagagtgactgtaatgaactgg
aaaaaatggcgatcagatcttggcgttgagctcaaagaggaccctgcaaacgtagagagg
gatgaggaaagttctggaaatccatggaacctaaatgtgctgctccgtaatattcgatcc
agacgacatcgacagcaggaaaactatattctctag
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