Cyprinodon variegatus (sheepshead minnow): 107104279
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Entry
107104279 CDS
T06110
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107104279 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107104279 (fanci)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
107104279 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
107104279
NCBI-ProteinID:
XP_015259736
Ensembl:
ENSCVAG00000005854
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MKGEMDKIVSLAEEESTAELQKYLSSLTNDQLITATTNSALKGKKVCSMIKGIFKGSPPV
SSEGANRRLLVYEHLIPLCESGDLQTEVAADIIGLLMLETHTLPGSSLAKLANIFVDAIR
VGKMGSGKSLELFPTILTALAACEALSYGKGELSGEEYKKQLINSLCSSRWDPQCVIHLT
TMFRDVPMSSEELQFLVEKVLRMFSKLDLQEIPPLVYQLLLLSAKGCKKQILDGIVSYFR
DQDIRQEEEQKNGENLHLEVQTIPQDQLRHVEGTVILHIVFAIRMDHELGREFLKSFKTS
YGNLCPFSVALLLSFARIQRYEEQVFDLLKGAVIRSFKDEQLQQGSKFLQDVLPGHCSVA
KMILDAVKNSVFGWDHVTQGLVQLGFVLMDTFGPKPGPFGKSTEGPVSAARTPQQQACKL
GGQMLLQGFKIHEPIRGEILEQVLNRLVTKTASPVTHYLDLFSDLVTSAPMILLESSSKV
TETFDHLTYLPLATVQGLLKAVQPLLKVSMSLKDSLILVLRKAMFSSQLDGRKSAVTGFL
LLLKNFKVLGSLSSSQCSQAISSSQVQVDVHSRYNSAANEAFCLEILSSLRRCLGQQADV
RLMLYEGFYDVLRRNSQLASSIMQTLLSQVRRYYEPEQDLLPPIKLEPCITAHGDQVFLQ
EPLAHLVSCTVHCLMWLQNAQRAANLNADDSDEEEEEEGYRAELQAMLESMTRRMIKCEL
EDFELDKSAEFSLGSSVGVKNNIYAVLVMGLYEVLMEYNFIKANYNKSRFEELLELFNKH
HKLSEILKEKSGKGRAPSHKTPRSLLSMGFVSTLITVLFRDNSQSREEALSVLRSSGEFV
RYALCVAVQKIQQLEESGHTDGPDGQHSDKTFRFLCDMTSVLMWRYTNIPAAVEEAGRKE
KRCSLSQLCLEGLLRIFTTCQQRYPERMAQLLSTMDMAEDEAEQDDAAEMNYFYIRQFQR
ALFTQLSGGEEEFNSREAQLLVSILTVLSRQLKPTSKQFTQMITWTVKICKETSFEDSAF
CKGLLSLLFSLQVLYKSQTGLLLELCQDIHSQLGDIDQDVEVEKQSHFSIINMKTATTAA
LLVLSQVDRVLDEVDWLITRKKTQTASDKPASAEASQAAAQQDPVEKAVTLQLGTLLTAL
NELVQTALLPGNCTITLLRELSRTYTILTTLVKYYIQMCASQHGYLPNRFEKLVKLSGSH
LTPQCYSFITYAQSGESSFGDDKKKKKRNEVNTAASAKLLRETKAIPNLIFSIEQYEKYL
ITLSKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQEEPEETQESQETEEAQEPKQKKR
KQ
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgaaatggataaaatcgtctccttggcagaggaagaaagtacagctgaactc
cagaagtacctctcttcactgactaatgaccaacttataactgcgacaaccaacagtgca
ctgaagggcaagaaggtctgttctatgatcaaaggaatatttaaaggatctccacctgtt
tccagtgaaggagcaaatcgcaggctcctggtgtatgagcatctcattcctctctgtgag
tctggggatcttcagacggaggtggcagctgatatcatcggtctgctgatgctggagact
catacattgcctggatcatctcttgccaaactggccaatatcttcgtcgacgccattaga
gtggggaaaatgggcagcgggaaatccctggagctgtttcctaccatcctcactgccctt
gctgcatgtgaagccttgtcatacggcaaaggggagctgagcggtgaagaatacaaaaag
cagctcattaacagcctctgctccagcagatgggatccacagtgtgttatccacttgaca
accatgtttagggatgtgcccatgtcatcagaggagctgcagtttctggttgagaaagtc
ctgagaatgttctccaaactggatttgcaggagatcccgccactggtttaccagctgctg
cttttatctgctaaaggttgtaagaaacagattctggatggaatcgtcagctactttagg
gaccaggatattcgccaggaagaggagcagaaaaatggagaaaacctgcatctagaagtt
cagactatcccacaggaccagctgaggcatgtagagggaaccgtcattctccatatagtt
tttgccataagaatggaccatgaactcgggagggaattcctgaaaagctttaagacgtcc
tatgggaacctgtgtcctttcagcgttgccctgttgctctcttttgcacgtatccagcga
tacgaggagcaggtttttgaccttttgaaaggggctgtaatcaggagctttaaggatgag
cagctgcagcaagggtcaaagtttctacaagacgtcctgccgggtcactgcagtgtagcg
aagatgatactagatgcagtgaagaacagtgtgtttggatgggatcatgtcactcaagga
ttggtgcagctcgggttcgttcttatggacacatttggacccaaacctggaccatttggc
aagtccacagagggacccgtcagcgctgcccggaccccccaacagcaggcgtgcaagttg
ggcggacagatgctcctacagggcttcaaaatacacgagccaattagaggtgagatactg
gagcaggtcctgaaccgtctggtcacaaagaccgcctcgcctgtcactcattacttggac
cttttctctgacctcgtgacctccgctccaatgattctcctagagtcgtcctccaaggtt
acggagacgtttgaccacttgacctacttgcctctggccaccgttcaaggcctgctgaaa
gctgtccagccgctgcttaaagtcagcatgtctctgaaagattctctgatcttggttctt
cgtaaggccatgttttccagtcagctggatggcaggaagtcagcagtgactggatttttg
ctgttgctgaaaaactttaaggttttgggtagcttgtcttcaagtcagtgcagccaagct
atctcctccagccaggtccaagtggatgttcactctcgctacaactctgctgccaatgaa
gccttctgcttggagattctcagcagcctgcgtcgctgccttggtcagcaggctgatgtg
aggcttatgctctatgagggtttctatgatgtcctacgtcgcaactctcagcttgcgagc
tccatcatgcagactcttctgtcacaggtgaggcggtactatgaaccggaacaggatctg
ctcccccccatcaaactggagccatgcatcaccgctcacggcgaccaggtcttcctgcag
gagccactggcgcatttagtgagctgcactgttcactgcctgatgtggctgcagaatgca
cagcgagctgcaaaccttaacgccgatgatagcgacgaagaggaagaggaggagggatac
agagccgaattacaggcaatgctggagagcatgactagacgcatgatcaaatgtgaactg
gaggactttgaattggacaaatctgcagagttttctttgggatccagcgttggagtgaag
aataacatctacgccgtgttggtgatgggactatatgaagtcctgatggagtataacttc
atcaaagcaaactacaataagagccgcttcgaggagcttcttgagctcttcaacaagcac
cacaagctgtccgagatcttgaaggagaaatctggaaagggtcgagcgccgtcacacaag
actccacgcagtttactctccatgggcttcgtctcaactctcatcaccgtcctcttcaga
gataacagtcaaagcagagaggaggctctgtctgtgctccgatcaagcggggagtttgtg
cgttacgctctgtgtgtcgcggttcagaagatccaacagctggaggaaagcggtcacacg
gacggtccagatgggcagcattcagacaagaccttccgcttcctctgcgacatgactagt
gtgctgatgtggcgttacactaatatccctgctgcggtggaggaggcagggaggaaggag
aagcgctgcagcttgtcccagctttgtctggagggtctgctgcggatcttcaccacctgc
cagcagcgttacccagagaggatggcccagctgctttctaccatggacatggcagaagat
gaagctgagcaggacgatgctgcagagatgaactacttttacatcagacagttccagagg
gcgctgttcactcagttgagtggaggagaggaggaatttaacagccgagaagctcagctg
ctggtcagcattttgaccgtgctttcccgtcagctgaagcccacctctaaacagtttact
cagatgatcacctggacagtaaagatctgcaaggaaactagttttgaggactctgccttc
tgtaaggggctcctgtcccttctcttcagcctgcaggtcctctacaagagtcaaacgggc
cttttgctggagctttgtcaagacattcacagccagttgggagatattgatcaggatgtg
gaggtggaaaaacagtctcattttagcatcatcaacatgaaaacagcaacgactgcagca
ctgctggtcctgtctcaagttgaccgggttcttgatgaagtagactggcttatcaccaga
aagaaaactcaaacagcctctgataaacctgcctctgccgaggcctcccaggctgcagct
cagcaggatccagttgagaaggcagtgactctgcagctggggaccctcctgaccgcatta
aatgagctggtccagacggctctgctgcctggaaactgcaccataacactgctgagagag
ctgagccgtacttacaccatcctcaccaccctggtcaaatattatatccagatgtgtgcc
agccagcatggatatttgccaaatagatttgaaaaattggttaaactctccggttcccac
ctgacgcctcaatgctactcctttatcacatatgcccagagtggagagtccagcttcggg
gatgacaagaagaaaaagaagaggaacgaggtgaataccgctgcttcggcaaagctgctg
cgtgaaacaaaggccatccccaaccttatcttcagcattgagcagtatgagaagtacctc
atcacactctccaagaaatcaaaggtcaatctgatgcagtacatgaagctgagcacttca
agagatttccgcatcaacgctgctaccttggatgcagctctgcaggagcaggaggaacca
gaggagactcaggagtcacaggaaacagaggaggcacaggagcccaaacagaagaaaagg
aaacagtga
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integrated database retrieval system
