Cyprinodon variegatus (sheepshead minnow): 107104289
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Entry
107104289 CDS
T06110
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107104289 (dennd4b)
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107104289 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
107104289
NCBI-ProteinID:
XP_015259747
Ensembl:
ENSCVAG00000013963
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MTDEKCPQLVDYFVVAGLDPAGPWKSLDEDGRTSSFPPSSSSVSVRAGEPVTDLVVIARG
LGEEVPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYRRGRDKPPILDLGVLYEGKEQLK
QGWYVIETTPYSRSASLSSGGAPTAHRVFLTYRRALDSQGLDTLGVTDIALLMPSKGEVA
PHTFCRVDKNLNTGMSQRDQSGLAQGSKPLCSAGLISRYPVEDLEAFPLPESVPVFCLPM
GVTVESWPLNSKYQLPIFSTFVLTSASGDKVYGAAIQFYESFSREHLSERQNIRLGLLSV
VDRRPITGRSLHAKKSICVLSHWPFFTVFQKFLTFIYRYSISGPHVLPLEKHISSFMHNV
PFPSPQRPRILVQLSPYDNLLLCQPVSSPLQISGASFLKLLQNLGPGNACTLLLAVLTEH
KLLLHSLRPDVLTSVSEALVSMTFPLRWLCPYIPLCPLQMADVLLAPMPFIVGVHSSYFD
FYDPPPEVICVDLDTNTIFQSDDKKQLSWRSLPRKHGKSLFSTLTNLHRTLEKICSPGQE
EATLEFLLTDYDQIYRRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDTTTDCSS
LFNLQGFLKSRERAQQKFYVQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKVDVEKP
EEVRLVDLDETHSGEHTVFIMPPEEPQEADGSECAAHYSYETFPTLKPELFDRPQDPLRV
PAKGSAPNSPAPRRTKQEIKLAQKRAQKYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAES
SKVRALHTAYNVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPN
TITYGYYNKAVLECKWPSTNQGGRLRWAKLRNVLLAVSQFRQPIKRRRKSGSVGSRGEAM
IEPGQKPRPQSALIRQSSWSGLNESSSHESLSGSLVKSCSLSSMKTPGNKIKACKKSSLL
HGSGTDGDAVLRKPPLGRREASAPPAAPSGGAVVRRSDVCLSTFYAECVESELDSSGDPE
ERYSRSDRTRRSSDRNKDGVVDENSNHVASPSRAGLAGKLQQLLTPTRHRGSVRRAASVE
NRRSGRGGRDDGGIGQRASDQRQSKKSQMAESLLRAKERLVNATSESSLSVGSDLDLTET
PTSSYPLRRSWDANQEGAGMEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSACPFC
GASFVPFLNAEFCDLGPVSSAERCNMNLEDEVESAVRPPGGHEGSLRPHCNGLSDDSSSE
TSTYSETSKATTVSSVGATPQVTVAYLSPLVLRKELESLLENEGESVLAQPQFLDSHSII
FWNLFWFFQRLGLPSNLLELVRSSPLLSQFTQSPDEASEIFLSLFAVAFDKKYKAAYLRL
GSSLGRDELRRKKVQPPGTKAIDCRRSFHPPLEC
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgagaaatgtccccagctggtggactactttgtggtggcgggtctggaccct
gctggaccctggaagtccctggacgaagacggccggacctcctccttccctccctcctcg
tcttcggtgtcggtccgggcaggagagccggtgacggacctggtggtcatcgctcggggt
ctcggggaggaagtaccagaaggtttcacctgcatcgagaagaccctggggggtcactct
gctgagctgagcgccggcctcatcaacaacccgcacctgtacctgtgctaccggagaggg
cgggacaaaccgcccatactggacctgggggttctatatgaggggaaggagcagctgaaa
cagggatggtacgtcatcgagaccacgccctacagtcgctcagccagcctgagctctggt
ggcgctcccacggcccaccgggtcttcctgacctaccgccgggctctggactcacagggt
ctggatacgctgggagtcactgacatcgccctgctgatgcctagcaagggggaggtggca
ccgcacaccttctgtcgggttgacaagaacctcaacactggcatgtcacagagggaccag
tcaggcctggctcagggatccaaacctctgtgctctgcaggtctgatcagccggtacccg
gtggaggacctggaggcgttccctcttcccgagtcggtgccggtcttctgcctgccaatg
ggcgtcaccgtggagagctggccactgaactccaagtaccagctgcccattttctccacc
ttcgtcctcacatccgcctccggagacaaggtttacggagctgccatccagttctacgag
tccttctccagggagcacctgtcggagcggcagaacatccggctcggccttctcagcgtg
gtggaccggcggcccatcaccggccgcagtctgcatgccaagaagagcatctgcgttctc
tcccactggccgttcttcacagtcttccagaagttcctcacctttatctacagatactcc
atctccgggccgcatgtcctaccgctcgagaaacacatctccagtttcatgcacaacgtc
ccgtttccttcccctcagcgtcctcggatcctcgttcagctctcaccctacgacaacttg
ctgctttgccagccggtctcctcgccacttcaaatcagcggagcaagcttcttgaagctt
ctgcagaacctgggtccagggaacgcctgcacactgctgctggccgtcctcaccgaacac
aagctcctgctgcattcgctgcgacccgacgtcctcacatccgtcagcgaagccctagtc
tctatgaccttccccctgcgctggctctgcccctacatccctctgtgcccgctgcagatg
gccgacgtgcttctggcgccgatgcccttcatcgtcggcgttcactccagctacttcgac
ttctacgacccgccgccagaagtcatctgcgtcgacctggacaccaacaccatcttccag
tctgatgataagaagcagttgtcatggcgatcgttacctaggaagcatggaaagagtctg
ttcagcaccctgaccaacctccacaggaccctggagaagatttgcagtcccggccaggag
gaggcgaccttggagttcctgctaacagactacgaccagatctacaggcgtcagaagcag
ctggagctggagatccaggaggccttcctccgcttcatgagctgcctgctgcgaggatac
cgggcctacctgctgcccatcacgcaggcgccgtccgacaccaccaccgactgcagctcc
ctgttcaacctgcaggggttcctgaagtctcgcgagcgagcccagcagaagttctacgtc
cagctgaccaggactcagatgttcacccagttcatcgaggaatgctcgttcgtcagcgac
cgacacgcctgcctggagttcttcgacgaatgcgtccagaaggtggatgtggagaagcca
gaggaggtgaggctggtggatctggatgagacccacagcggagagcacaccgtcttcatc
atgccgcctgaagagccgcaggaagctgatggctctgagtgcgccgcccactacagttat
gagacattccctacgctgaaaccagaactgtttgaccgaccgcaggacccgctccgagtc
ccggccaaaggaagcgcccccaacagccccgccccacgacgcaccaaacaggagatcaag
ctggcccagaaacgagctcagaagtactctgcggtcccagacatgtggtccaagtgcttg
ttgggtcactgttacggcctctggttcatctaccttcccaccttcgtccgggccgagagc
tccaaggtccgggcccttcacacggcctacaacgtcctcaagcacatggagacccggaag
gtggtgctgccagatgaggtgtgttaccgcatcctgatgcagctgtgcggtcagtacggt
cagccggtcctcgccgtcagagtcctgctggagatgaagaaggctggaatcactcccaac
accattacctacggatactacaacaaggccgttctggagtgtaagtggccatcgaccaat
cagggtggtcgtcttcgctgggctaagctaaggaacgtcctattggctgtgtcccagttc
agacagccaatcaaacgacggcggaagagcggttctgtgggctccagaggagaagccatg
atagaacctggccagaagccccgcccacagtccgctctgattcgtcagtctagctggagc
ggcctgaatgaaagctccagtcacgagtctctgagcgggtcgctggtaaagagctgcagc
ctgagcagcatgaagacgcctggcaacaagatcaaagcttgtaagaagtcgtccctcctc
cacggttcagggacggatggggacgccgttctccgtaaaccgccgctgggtcgtagagag
gcatctgctccacctgcagcgccctctggaggagcggtggtgcggcgcagtgacgtctgc
ctctccaccttctacgctgagtgtgtggagtcggagctggactccagtggcgatccagag
gagagatacagcaggtctgacagaacaagacgttctagtgacagaaacaaggacggcgtc
gtagatgagaattccaaccacgtcgcgtctccgagccgagccggtctggcaggaaaactg
cagcagcttctaacaccaaccagacacagagggtcggtaaggcgagccgccagcgttgaa
aaccgccggtcaggaagaggaggaagagacgacggaggtattggccagagagcgtcggat
cagaggcagtccaagaaatcccaaatggctgaatctctcctgagggcaaaggagcggctg
gtgaacgccacctctgagagctcgctgtctgtaggaagtgacctggacctgacagagacg
ccaacctcttcgtatcctctgcgcaggtcgtgggacgccaaccaggagggggctgggatg
gaggttctgatgtccagctgctcgctgtgccgcagctgcaattcgctggtttacgacgag
gagatcatggcgggctggacctctgatgactccaacctgaactcggcctgcccgttctgc
ggcgcctccttcgtcccgttcctgaacgcagaattctgcgacctgggacccgtcagcagt
gcggagcgttgtaacatgaacctggaggacgaggtggagagtgctgtgaggccccctggt
ggtcatgagggttctctgcgacctcactgtaacggactgagcgacgactccagctctgaa
accagcacctactctgagaccagcaaggccaccacggtgtcgtcggtgggagcgactcct
caggtgacggtggcctatctgagtcctctggttctgagaaaggagctggagagtctgctg
gagaacgagggcgagtcggttctggcccagccgcagttcctggacagccactccatcatc
ttctggaatctgttctggttcttccagcgactcggcttgcccagtaaccttttggagctg
gtgcgcagctcaccgctgctcagccagttcacacagtctccagacgaagcctctgaaatc
ttcctgtctttgtttgcagttgcgtttgataagaagtacaaggcggcgtacctgcgcctc
ggcagctctctgggtcgggatgagctccgcaggaagaaggttcagcctcctggtaccaaa
gccatcgactgcagaagaagcttccacccgccgctggagtgctga
DBGET
integrated database retrieval system
