Cyprinodon variegatus (sheepshead minnow): 107104435
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Entry
107104435 CDS
T06110
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg02010
ABC transporters
cvg04145
Phagosome
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107104435
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107104435
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107104435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107104435
Enzymes [BR:
cvg01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
107104435
Transporters [BR:
cvg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
107104435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_30
AAA_16
AAA_29
nSTAND_NTPase5
Rad17
Motif
Other DBs
NCBI-GeneID:
107104435
NCBI-ProteinID:
XP_015259918
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
ETLIPFYTGRAIDILGNHYQQSEFLTSLLFMVLYSIGSAVGAGCRGGLLGCAIDSCTRRI
KLKLFKVLTKQEIGFFETTKTGEIISRLSKDTTLMGETVGLNVNVLLRTFMKTMGMIFLM
MSLSWKLTLLVLMETPITGLIQNIYDTHYQRLSRALQDSMAHATDAVNEVVFSIRLVRSF
RTEQHETSRYEKHLKEIHTLKTQRDTVRAVYLLARRLTDLGMKVFILYYGRLFIQRGQMT
TGQLVSFIIYQYDLGENIGTLAFVFGDMMNSVVAAGKVFEYMDRKPLVNTDGKLKPDQLK
GKISYCNLSFAYPSNLGKSVLQDFNLELKPGQVTALVGPSGEGKSTCVSLLQRLYEPQEG
EILLDGEPLKSYDHHFFHRKIAVVSQEPVLFSGSIRDNITYGLTDCSQERIEEAARKANA
HDFIKTLEKGYDTEVGESGGQLSKSERQRIGIARALVRDPKVVILDEITSSLDAESENKV
LQALASCPNQTLLVIAHRLKTIEKADQIVVVRGGQVEEKGTHQELMDLQGSYHKLRNELF
EDVDSLQ
NT seq
1646 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacattaatcccattctatacaggcagagccattgacatccttggaaatcattacc
aacaaagtgaattccttacaagtctactcttcatggtcctttattcaataggaagtgctg
taggtgctggctgcagagggggccttttaggttgtgccattgattcctgcacacgcagaa
tcaaacttaaactgtttaaggttttgacaaaacaagaaataggattctttgagactacaa
agacaggtgaaataatatctagattgtcaaaggataccacactgatgggagaaacggtgg
gtctaaatgtcaatgtgctgctgaggacattcatgaagacgatggggatgattttcttaa
tgatgagcctgtcttggaagctcacattacttgtgttgatggaaacccctataacaggcc
ttattcaaaacatctacgacacacattaccagaggttatccagagcattgcaggactcaa
tggctcatgctactgatgctgtgaatgaagttgtgttttctattcgtctggtacgaagtt
tccgcacagaacagcatgagacaagtcgctatgaaaaacacttaaaggaaatacatactc
tcaagacccagagggatacagtgagggctgtttatttgcttgcaaggaggttgacagatt
taggtatgaaagttttcatcttatattatggccgacttttcatccagagaggccagatga
ccaccggacaactggtttcttttatcatctaccagtatgaccttggagagaacattggga
cacttgcctttgtttttggtgacatgatgaactcagttgtagctgctgggaaagtgtttg
agtacatggaccgaaaacctctggtcaacacagatggaaaactaaaacctgatcagctga
aaggaaagatcagttattgcaatctcagttttgcctatccttcaaacctaggcaaatctg
tgttacaggactttaacttggagttgaagccaggtcaggtgacggctctggttggtccat
ctggagaaggaaaaagcacctgtgtgagtctcctgcagagattatatgagcctcaggaag
gagagatccttttggatggagaaccactgaaatcctacgaccatcatttcttccacagga
agattgcagtggtgagccaggagcccgtcctcttctctggatccatcagagataacatca
cctacggactgactgactgctcacaggagaggattgaggaagcagcacggaaagccaacg
cccatgacttcattaaaacactggagaaaggctacgacacagaggtaggagagagtggag
gccagttatccaagagtgagaggcagaggattgggatcgctcgagctctggtcagagatc
cgaaggtcgtcattctggacgaaataaccagctccttggatgctgagagtgaaaacaagg
ttcttcaggcgcttgcaagctgcccgaaccagaccctgctggtgatcgctcacaggctga
agaccatcgagaaggcagatcagattgttgtggtcagaggaggtcaggttgaggagaagg
ggactcaccaggagctgatggatctgcaggggagctaccataaactgaggaatgagctgt
ttgaggatgttgactcactacagtga
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