Cyprinodon variegatus (sheepshead minnow): 107104482
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Entry
107104482 CDS
T06110
Name
(RefSeq) zinc finger FYVE domain-containing protein 16-like
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
cvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107104482
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107104482
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107104482
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107104482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SARA_C
FYVE
Motif
Other DBs
NCBI-GeneID:
107104482
NCBI-ProteinID:
XP_015259966
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MDSFFKAAVCDLDKVLDDFELNSEEAECQPVFLKPPAYPFCPDVPSGPTSLPDLNSLHYG
SAGSCSDASNGQQTADGGEVRGQPLTAVDLLSSVDRRPAKNAAPPCPDRTLKPVCDLVND
ASSAILVRTNSQEEEALLVDFDSPAVTEVGVGLNINSVEEEQTELSCHQQSGGYSASLSL
LDIIFPAAAEKSSEPSDQSESADADEKESEEQLEGASSDRHKAESDNEVTSLSEEQPSDQ
AAEGESDEGIECESSNGEPGSLSCLPLAVSMCGALVNSTTSEDPPGAAEASESTGGTDDG
RDGSSDSEQMSERRPSPEGQHASLGSAPAEPDPPYAPEFGFEYLPESDQAELLVTDEELD
AFLQAHAEAEQGAGPSLCSRGSGDEPQCLSESGQVLEERRDEPEPGSCGQEQEEPEALSS
GDGTSAASAEGSFSPSALSASGESIPSQCHDSYGGARPKQPHSQTARPPPAGEEGTEPST
SPTPEEQEHPAPTEDPSKFRDSDLSSPPYQQDFSAGFDELSEPPPYPGEEPLGAARPANW
KGDGEEELGSIQPAWVPDAEAPSCMKCHQTFTFIKRRHHCRACGKVYCAGCCNRKCKLKY
LDKEARVCVLCFDTIHKDLACKLAVPGAPEALGVTAAPGSAGSDPGGDEPSGSEAPGAAP
VERAPVSGPWDYGLLSGIGSSVSRIPSLLPDNEDELPPLLITTGEDDGEDVLVEESPAPC
QIRHLLEEGGPRPLTFVLNANLLINVKLVTYGSRQCWCFGSNGLQALGQKELIFLLECLS
GEKTLPRDLFSLYLTIYQDAQKGKFVEELDNVTFTSSFLDSKDHAGMLFFAPTCQPLDGL
TLPPQPFLFGLLVQKLEVPWAKVFPLRLLLRLGAEYDMYPTTLISVRFRESVYRETGHTI
MNLLADLRNYQYSLSVVEGLRIHMEMGHSYIEIPKASFSEMQKVVNSSNEHVISIGASFS
QEADSHLVCFQNEEGNYQTQANSKPGETRTVTGASFVVFNGALKASSGFIAKSSIVEDGL
MVQIPPETMESLRSALREQTDFDIPCGKNDGGEVKENVTVRWVDWSSPVNSGKTSGVDGR
PLDGVPSVRMEQDTEFESHSRTIRCTEVFYQLKSPDCSLAAVLSSCSGFQKEIALATCSA
LAPHLSVLTSSGINSLWLRVSTQADMVEYQAGSGGRLLPQRYMNEMDGALIPVIHGGGAS
VPQTAMDMELVFYITHSLQ
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcttcaaggcagcggtttgtgatctggacaaggttctggatgactttgag
ctcaattcagaggaagcggaatgccagcctgttttcctgaagccccctgcgtacccgttc
tgcccggacgtccccagcggcccaaccagcctcccagacctcaattctctccattatggc
tccgcaggaagctgttcagatgcctccaatggccagcagaccgctgacggtggcgaggtg
agaggtcagcccctgactgccgtggaccttctgtcctccgttgaccgcaggcctgctaaa
aacgcggccccgccctgcccggacagaactctgaagccggtgtgcgacctcgtaaacgat
gccagctcggccatcttggttcggaccaacagccaggaggaggaggcgctgctggtggac
tttgacagccctgcggtcacagaggtgggggtggggcttaacataaacagtgttgaggag
gagcaaactgagctgagctgccaccaacagagcggcggttactccgcatcgctcagtttg
ctggacattatttttccggcggcggcggagaaaagctctgaaccttccgatcagtcggag
tcagctgatgcagacgagaaggagagcgaagagcagctggagggggcgtcctcggaccgc
cataaagcagagagcgataacgaagtgacgtctttaagcgaggagcaaccttcagatcag
gcggctgaaggcgagtctgacgaagggatagagtgtgaatcatcaaacggcgaaccgggc
agcttgtcatgcctgccgctggccgtgtcgatgtgcggcgctctggtgaactccaccacc
tcagaggatcctcccggggcagcagaggcgtctgagagcacaggaggaacggacgacggc
agagacggctcctctgactcggagcagatgtcagagaggaggccgtctccagaggggcag
cacgcttcgcttggttctgctccggcagagcccgacccgccctacgctcctgagttcggc
tttgaatacctgcctgagagcgatcaggcggagctgctggttacagacgaagagctggac
gctttcctgcaggcgcacgcggaagcagagcagggggcggggccttctctctgctccaga
ggttctggagatgaaccccagtgcctctcggagtcagggcaggttctggaagaacgacga
gatgagccagaacctggaagctgtggccaagaacaggaagagccagaggctctgtcatct
ggggatggaacatctgctgcatctgcagagggaagcttcagtccttctgctctttcagcg
tcaggagagtctataccgtcacaatgccatgactcctatggaggcgccagaccaaaacag
ccccacagccaaaccgccagacctccaccagcaggagaggaaggaacggagcccagcacc
tccccaacacctgaagaacaggagcacccagctcccacagaggacccgtctaaattcagg
gactctgacctcagcagccctccgtatcagcaggatttctccgcagggtttgacgaactc
tcagagccgcctccataccccggggaggagccgctgggcgctgccaggccggccaactgg
aagggggacggtgaggaggagctggggagcattcagccagcgtgggtgccagacgctgaa
gctccgtcctgcatgaaatgccaccagacgttcaccttcatcaagcggcggcatcactgt
cgggcctgcgggaaggtgtactgcgccgggtgctgcaacagaaagtgtaaactcaagtac
ctggacaaggaggctcgtgtgtgcgtcctctgctttgacaccatacataaagacttggca
tgtaaactggctgttcctggcgcacctgaagcacttggtgtgacggcagcacccggctca
gctggatctgaccctggaggtgatgaaccatccggctctgaggcccccggagccgccccg
gtggagcgagccccggtttctgggccctgggattacggcttgctttctgggatcggttct
tcggtgagcaggattcccagtctgcttccagacaacgaggatgagctgcctcctctgctc
atcaccaccggggaggatgacggagaagatgttctggtggaggagagtccagccccctgt
cagattcgacacctgttggaggaaggagggccgcgccctttgacctttgttctgaatgcc
aacctgctgataaatgtcaaactggtcacatacggcagcaggcagtgctggtgcttcggc
tccaacgggctgcaggctctggggcagaaggagctgatttttctgctggaatgtttgtcg
ggagaaaaaacgcttcccagagacctcttttctctttatctcaccatttaccaggatgcc
cagaaagggaagtttgtggaggagctggataacgtcacgttcaccagcagtttcctggac
agcaaagatcacgccgggatgctgttcttcgcccccacctgtcagcccctggatggcctt
acgctgcccccccaaccgttcctgttcggcctcctggtccagaaactggaggtcccttgg
gccaaagtgttcccgctcagactgctcctgcggctcggagctgaatacgacatgtatccc
actacgctgataagcgtccgatttcgggagtcagtgtatcgagagacgggacacaccatc
atgaatttattggctgacctgaggaactaccagtacagcctgtcagtggtggaaggcctg
aggatccatatggagatgggacacagctacatagagatccccaaggctagctttagcgag
atgcagaaggtggtgaactcatccaacgagcatgtcatcagcatcggagcgagcttcagc
caggaggctgactctcacctcgtctgtttccagaacgaggagggaaactatcaaactcaa
gccaacagcaagccgggggaaactcgcacagtgactggggccagtttcgtggtgtttaac
ggagcgctaaaagcctcgtcaggttttatcgccaagtccagcatcgttgaagatgggttg
atggttcaaatcccaccggaaaccatggagtctttgcgctccgccctgagggagcagaca
gacttcgacataccctgcggcaagaatgacggcggggaagtcaaagagaacgtcacggtt
cgctgggttgactggtcctcgcctgttaactcgggtaaaaccagtggagttgatgggaga
cccctggacggcgtccccagcgtgaggatggagcaggacacagagtttgagtcgcacagc
cgcaccattagatgcaccgaggtgttctaccagctgaagtctcctgactgcagcctggcg
gcggtgctgtcgtcctgcagcggctttcagaaggagatcgccttggcaacatgcagcgct
ctggctcctcacctctcggttcttacctcaagtgggatcaactcgctgtggcttcgcgtc
tccacccaggctgacatggtggagtaccaggccggatccggaggcaggctcctccctcag
cgctacatgaacgagatggacggcgctctgatccccgtcatccatggaggtggcgccagc
gtgccgcagaccgccatggacatggagctggtgttctacatcacacactctctgcagtga
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integrated database retrieval system
