Cyprinodon variegatus (sheepshead minnow): 107104530
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Entry
107104530 CDS
T06110
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107104530
04082 Neuroactive ligand signaling
107104530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107104530
Ion channels [BR:
cvg04040
]
Ligand-gated channels
GABA-A
107104530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
107104530
NCBI-ProteinID:
XP_015260029
Ensembl:
ENSCVAG00000004934
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MEAFVVRGTSTTCSLLIFFMAALMRAQSGSVNDPSNMPLVKETVDRLLKGYDIRLRPDFG
GPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLW
VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL
EIESYGYTTDDIEFYWRGGHNAVTGVDKIELPQFSIVDHKLISKNVVFSTGSYPRLSLSF
KLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGQGPQRQKKAAEKTATANNEKMRMD
ANKWLVGNVVGRDDTLYARMKQRDLAGHDSIWEPIFMDDAALGLGDQKNKMDSHENILLG
TLDIKNDMGVTELALGLNDPRNTMLTYDSSNLQYRKSGLARHNFGRNALDRHMTQKKSRL
RRRASQLKVNIPDLTDVNSIDKWSRMIFPTVFSFFNIIYWLYYVN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctttgtggtaagagggacgagcacgacgtgttccttgttgatcttttttatg
gcagctttgatgcgcgctcaaagtggcagtgtcaacgaccctagcaatatgcctttggtc
aaagaaacggtggacagactgttaaagggttatgatatacgactgagaccagattttgga
ggtcctccagttggagtgggaatgaatatagacatagccagcatagatatggtatccgaa
gtcaacatggactacacattgacaatgtacttccagcaagcctggcgagacaagcgactg
tcctactccgagatcccactcaatctgactttagataacagggtggcagaccagctctgg
gtccctgacacctacttcctcaatgacaagaagtcatttgttcatggtgtcactgtgaaa
aatcgaatgatccgactgcatccggatggcactgttttgtacggtctaaggattactact
acagctgcttgtatgatggacctacggaggtatcctctggatgagcaaaactgcacactt
gagatagagagttatggttacaccactgatgatattgagttttactggcgaggaggacat
aatgctgtgacaggggtggacaagattgaacttccccaattttccattgtggatcataag
ctcatctccaagaatgttgtcttctctacaggttcctatccacgtctttccctgagtttc
aagttaaagaggaatattggatattttatcctgcagacatacatgccttctatcctcatc
accatcttgtcttgggtctctttctggatcaactatgatgcctctgctgcgagagtggct
ctgggtattaccacggtgctcaccatgacaacgattaacacccacctgagagagaccctt
cccaaaatcccttatgtcaaggccattgacatgtacctcatgggctgctttgtatttgtc
ttcatggctctgctggagtatgcactggtgaactacatcttctttggccagggtcctcag
cgtcagaaaaaagcagctgagaaaacagcaacagcaaacaatgaaaagatgaggatggat
gcaaataagtggcttgtgggaaatgtagttggcagagatgatacgctttacgcaagaatg
aaacagagagacctagctggccatgattcaatatgggagccaatctttatggatgatgct
gcgcttggacttggtgatcaaaaaaacaagatggactcacatgaaaacatcctcttgggt
accttggatatcaagaacgacatgggtgtcacagagctggctctaggtctcaatgatcca
cggaataccatgttaacatacgacagctcaaatctgcaatatcgcaaatcagggctggca
agacacaactttgggcgaaatgctctggatcgccacatgactcaaaagaaaagccgacta
cggaggcgggcctctcagctgaaagtaaacattccagatttgactgatgtaaactctatt
gacaaatggtcacggatgatcttccctacggttttttccttctttaacattatttactgg
ctttactatgtcaattaa
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