Cyprinodon variegatus (sheepshead minnow): 107104533
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Entry
107104533 CDS
T06110
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145
Phagosome
cvg04814
Motor proteins
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107104533
09142 Cell motility
04814 Motor proteins
107104533
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107104533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107104533
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107104533
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
107104533
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
107104533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Beta-prop_DCAF4
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
107104533
NCBI-ProteinID:
XP_015260030
Ensembl:
ENSCVAG00000000632
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKRRKEEERKKAEQQLKEAPIQQDDSDLEKKRREAEA
LLQSVGITPDAAVVPPPTSPTAKSAGTPSEAGSQDSDGAVGPRTLHWDSDPSTLQLHSDS
ELGRVAPKLGMAKVTQVDFPPRETVSYTKETQTPAPTQAKEEEEEEEEIAPVQPVIEDQT
EKPDQNEEEEAPPHELTEEEKLQILHSEEFTNFFDQSTRIIERALSQHVDIFFDYSGRDL
EEKEGEIQAGAKLSLNRQFMDERWSKHRVVTCLDWSPQYPELLVASYNNNEEAPHEPDGV
ALVWNMKFKKATPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPVQR
TPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELAFKQSKAV
AVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHQGPITGIHCHTAAGPLD
FSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLW
NLNNDTEVPTASVVVEGNPALNRVRWAHTGREIAVGDSDGRVLVYEVGEQIAVPRNDEWT
RFVRTLAEINENRDDAEELAAQRLAA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcggaactggagaggaagaagcaacggttagcgcag
atcagggaggagaagagaaggaaggaggaggagcgcaagaaggcggaacaacagctgaaa
gaagctcccatccagcaggatgactctgacctggagaaaaagagacgagaagctgaggct
cttctccaaagtgtggggataacccctgatgctgccgttgtccctcctcctacatctcct
actgccaaatcagcaggaactccaagtgaggcaggcagccaggactctgatggagccgtg
ggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgattct
gagctggggcgagtggctccaaagctgggaatggcaaaagtcacacaggtggacttcccg
ccgcgggaaacggtgtcctacacgaaggagactcagactcctgccccaacccaggccaaa
gaagaggaagaagaggaggaagaaatcgctccagttcaaccagtcatcgaggatcagact
gagaaacctgatcagaacgaagaagaagaagccccccctcatgagctgactgaggaggaa
aagctgcagatcctccactccgaggagtttacaaacttctttgaccagagcacccgcatc
attgagcgcgctctgtcccagcacgtggacatcttctttgactacagcggacgtgatctg
gaggagaaggaaggtgaaattcaggcgggagcgaagctttcactcaacaggcagtttatg
gacgagcgctggtccaaacatcgggtcgttacctgtctggactggtctccgcagtatcct
gagctgctcgtcgcctcatataacaacaatgaggaggctccacatgaaccagatggtgta
gctttagtttggaacatgaagttcaagaaagcaacgccagagtacgtcttccactgtcag
tctgctgttatgtctgcggcgttcgccaaatttcacccgaacgttgtggtaggagggaca
tattcgggacagatcgttctgtgggacaacaggagcaataagaggacccccgtgcagagg
acccctctgtctgcagcagcacacacgcacccggtgtattgtgtaaatgtcgtcggcaca
cagaacgcccacaacctgattagcatctcaacggacggcaagatctgctcctggagtctg
gatatgctctcccagcctcaggacagcatggagctcgccttcaagcaatcaaaagccgtc
gccgtcacctccatgtccttcccccttggcgacgtcaacaactttgtggtgggcagcgag
gacggctccgtctacatgtcgtgtcgtcatggcagcaaagcggggatcagtgagatgttt
gagggccaccaggggcccatcacaggaatccattgccacacagctgcagggccgctggac
ttctcccacctgtttgtcacctcctctttcgactggaccgtcaaactgtggagcaccaag
aataacaagccgctgtactcgtttgaagacaactctgactacgtgtatgacgtgatgtgg
tctcccactcacccagctctgtttgcatgtgtggacggagtgggtcacctggacctgtgg
aacctaaacaatgacacagaagtgcccactgctagcgttgtggtggagggtaacccagcc
ctcaatagggtcagatgggctcatactgggagagagattgcagttggggactctgacgga
cgtgttcttgtatatgaggttggagagcaaattgcagttccacgaaacgacgagtggacg
cgcttcgtccgcacgctggcggagatcaacgaaaacagagacgacgcagaggagctggct
gctcagcgcctggctgcctga
DBGET
integrated database retrieval system
