Cyprinodon variegatus (sheepshead minnow): 107104565
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Entry
107104565 CDS
T06110
Name
(RefSeq) vesicle-trafficking protein SEC22b-A-like
KO
K08517
vesicle transport protein SEC22
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04130
SNARE interactions in vesicular transport
cvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107104565
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107104565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107104565
Membrane trafficking [BR:
cvg04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
107104565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Capsid_VP7
Sec20
Motif
Other DBs
NCBI-GeneID:
107104565
NCBI-ProteinID:
XP_015260070
LinkDB
All DBs
Position
Unknown
AA seq
231 aa
AA seq
DB search
MNRFFSFTDRKPPQRTSGMRRHRLFPVGPHSEVHRPLPPQTAAAASQLDAAMIYLTMIAR
VADGLPLAASIQEDEQVSSRSASSCSSSRNLSCRSLSYSSSRSASSCSSSRNLSCRSLSY
SSSRSASIPNLDTYIQKTKKSYVDSRARRNLSSINAELQDVQRIMVANMEDVLQRGEALS
ALDTKASNLSSLAKKYRSDAKFLNTRSAYAKVAAAALVFITFIIYVRFWWL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgattcttttcttttacagacagaaaacctccgcagcgaacctctggaatgcgt
cgtcaccgtttgtttccagtcggacctcattccgaggtgcaccgaccacttccgccccaa
acagcagcagctgcttcacagctggacgctgcgatgatctacctgacgatgatcgcgcgc
gtggcggacggacttccgctggctgcgtccatccaggaggacgagcaggtctcgtcccgc
agcgcgtcgtcctgcagctcgtcccgcaacttgtcctgcagatcgttgtcctacagctcg
tcccgcagcgcgtcgtcctgcagctcgtcccgcaacttgtcctgcagatcgttgtcctac
agctcgtcccgcagcgcgtctattcctaatctagacacatacatccagaaaacgaagaag
tcgtacgttgacagcagagcccggcggaacctgagcagcatcaacgcagagctgcaggac
gtccagagaatcatggtggctaacatggaggacgtcctgcagcgaggagaagctctatct
gctctagacaccaaagccagcaatctctccagtctggccaagaaataccgcagcgacgcc
aagttcctgaacacccgctccgcctacgctaaagtggctgctgctgcgctcgtcttcatc
accttcatcatctatgtgcgcttctggtggctctga
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integrated database retrieval system
