Cyprinodon variegatus (sheepshead minnow): 107104663
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Entry
107104663 CDS
T06110
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04142
Lysosome
cvg04144
Endocytosis
cvg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107104663
04142 Lysosome
107104663
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107104663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107104663
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107104663
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107104663
Exosome [BR:
cvg04147
]
Exosomal proteins
Proteins found in most exosomes
107104663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
107104663
NCBI-ProteinID:
XP_015260197
Ensembl:
ENSCVAG00000017040
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKIEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISAKHNVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSMECLRAMLSANIRQNLQICVQVASKYHEQLSTQALTELFESFKSFEGLFYFLGSIV
NFSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDAELWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADHTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHISNLDRAYEFAERCNEPAVWSQLAKAQLQKELVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLLVLSPRLDHSRAVNFF
TKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDVELAEELLAWFLQ
ENKKECFAACLFSCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGFVPPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctacctattcgttttcaggagcacctgcagctccaaaatctggggatc
aatccggccaacataggcttcagcaccttgaccatggagtctgacaaattcatctgtgtc
cgtgaaaaagtgggggagcaggctcaagttgtgatcatcgacatggccgaccccaacact
cccatccggagacccatctcagccgacagcgccatcatgaatcccgccagcaaggtcatt
gcacttaaagacgcggccaaaacccttcagatctttaacattgagatgaagagcaagatg
aaggcacatactatgacggacgacgtgaccttctggaagtggatctctctgaacacagtt
gcacttgtgactgacacggctgtttaccactggagcatggagggagactctcaacctgtc
aaagtctttgaccggcactccagcctggctggctgccagatcatcaactaccgcaccgac
gcaaagcagaaatggctccttctcattggcatctcagctcagcaaaaccgagtggtggga
gccatgcagctctactctgtggacagaaaggtttctcagcccattgaaggccacgccgcc
agcttcgcccagtttaagatcgagggaaacgcagaagagtcaactctgttctgtttcgct
gttagaggacaggctggaggaaagttgcacatcattgaggtgggaactccaccgactggt
aatcagccgtttccaaagaaggcggtggatgtcttctttcctcctgaagcacagaatgac
tttccagtggccatgcagataagtgctaagcacaatgtggttttcctcatcaccaaatat
ggctacatccacctgtacgacctggagacgggaacctgcatctacatgaaccgcatcagt
ggagaaaccatctttgttaccgctccacatgaggccacctcggggatcattggggtcaac
cgtaagggacaggtgctgtctgtctgtgtggaggaagaaaacatcattccctacatcacc
aacgtgctgcagaatccagatctcgctctgcgcttggctgtccgcaacaacctggcagga
gctgaagagctttttgctcgtaaatttaacaacctgtttgctgctggcaactactctgaa
gctgccaaagttgctgctaatgcaccaaagggaatcctgcgcacacccgacaccattcgt
cgtttccagggtgttcccactcagccaggccagacctctcccctgctgcagtacttcggt
atcctgttggaccagggccagctcaacaagtttgagtccctggagctctgcaggcccgtc
ctgcagcagggtcggaagcagcttcttgagaagtggctgaaggaagacaagctggagtgt
tcagaggaactgggtgatctggtgaaagcggttgatcctaccttggccctcagtgtgtat
ctgagggcaaatgtccccaacaaggtcattcagtgctttgcagagaccggccagttccca
aaaatcgtactgtatgccaagaaggtgggctacaccccagactggatttttctgctcagg
aacgtgatgcgaataaacccagaacaaggtctgcagtttgcacagatgctggtccaggat
gaggagccactggcagacatcacacagattgtggatgtgtttatggagtacaacctgatc
cagcagtgcacctccttcctcctcgatgctttaaagaacaacagaccttctgaaggacca
ctgcagactcgcctgttggagatgaacctcatgcacgccccacaggttgcagacgcgatc
cttggtaaccagatgtttacacactatgaccgtgcccatattgcccagctatgcgagaag
gccggtcttcttcagagggcccttgagcactacacagacctgtatgacatcaagcgtgct
gttgtgcacacacaccttctcaacccagagtggctggtgaacttctttggctcgctgtca
gtggaggattcaatggagtgcctcagggccatgctctcagccaacatccgccagaaccta
cagatctgcgtccaggtggcctccaagtaccatgaacagctctccacacaggctctcact
gaactctttgagtccttcaagagctttgaaggtttgttctacttcctgggctctattgtt
aacttcagtcaggatgctgaagtccacttcaagtacatccaagctgcctgcaagacgggc
caaattaaggaggtggagaggatctgtagagagagcaactgctacgacccggagcgtgta
aagaacttcctcaaggaagccaaactcaccgatcagctgcccctcattatcgtctgcgat
cgctttgatttcgtccatgacctggtcctctacttgtacagaaacaacctgcagaagtac
attgagatttatgttcagaaggtgaaccctagccgtctcccggtcgtggttggtggtctg
ctggatgtggactgctctgaggatgtcatcaagagtctgatcttagtcgtccgaggacag
ttctccaccgatgaacttgttgcagaggttgaaaagaggaacaggctgaagctgctgctg
ccctggctggagtcccgtatccacgaaggctgtgaagaacctgctacccataatgccctg
gcaaagatctacatcgacagcaataataaccccgaacgcttcctgcgtgagaacccgttc
tatgacagccgtgtggtggggaagtactgcgagaagagggaccctcacttggcctgcgtg
gcttatgagcgagggcagtgtgaccaggagctaatcaatgtttgcaatgagaactccttg
ttcaagagcttgtctcgctacctagtaagacgcaaagatgccgagctgtgggccagcgtg
ctgctggagagcaaccctttcagacgaccactcattgaccaggttgtacaaacggctctg
tcagaaacccaggaccctgaggaggtgtcagtcactgtcaaagccttcatgactgcagac
ctgcctaatgagctcattgagctgctggagaaaattgtgttggacaactctgtcttcagt
gaacacagaaatctgcagaacctgctgatcctgactgccatcaaagctgaccacacgcga
gtgatggaatacatcagcaggctggacaactacgacgcccctgatatcgccaacatcgcc
atcagcaatgagctcttcgaggaggcgtttgccatatttaagaagtttgatgtcaacacc
tccgccgtgcaggtgctgattgagcatatcagcaacctggaccgggcctatgagtttgca
gaacgctgcaatgagcccgctgtgtggagccagctggccaaggctcagctgcagaaggag
ctggttaaagaagccattgactcctacatcaaagctgatgacccttcggcttatatggag
gtggtccaggcagctgataagagcggtaactgggaggacctggtgaagttccttcagatg
gcccgtaagaaggctcgtgagtcctacgtagagacggagctgatctttgctttggctaaa
accaaccgcctggccgaactggaggagttcatcaatggacccaacaacgctcacattcag
caggttggagaccgctgctatgacgagaaaatgtacgaagcagccaaactgctttacaac
aacgtctccaacttcggccgcctggcttccactctggtgcacctgggagagtatcaggct
gctgtggacggagcccgcaaagctaacagcacccgcacctggaaggaggtctgcttcgcc
tgcgtggacggccaggagttcagactggcccagatgtgtggcctccatatagtggtgcac
gctgacgagttggaggagctgatcaactattaccaggaccgtggctactttgaggagttg
atcaccatgctggaagccgccctgggcctggagcgcgctcacatgggcatgttcacagag
ctggccatcctgtactcaaagttcaaaccccagaagatgagggagcatctggagctgttc
tggtccagagttaacatccccaaggttctcagagcagcagagcaggctcacctgtgggcg
gagctggtcttcctttatgacaagtatgaggagtttgataacgccatcatcaccatgatg
aatcacccaaccgacgcctggaaggagggccagttcaaagacatcatcaccaaagtggcc
aacgtggagctgtactacaaagccgtccagttctacctggagttcaagcctctgttactg
aatgatttgctgctggtgctctcccccagactggatcactcgcgtgccgttaacttcttc
actaaggttaaacagctgcctctggtcaaaccttacctgcgctcagtacagaaccacaac
aacaaatcagtcaacgaagcacttaacaacctcttcatcaccgaggaggactatcaggca
ctgaggacatcgatagacgcctacgacaactttgacaacatctcgctggctcagcgcctg
gagaagcacgagctgatcgagttcagaagaatcgctgcctacctcttcaaaggcaacaac
cgctggaagcagagcgtggagctgtgcaagaaggacaagctctacaaggatgccatgcag
tacgcatcagagtccaaagacgtggagctggcagaggagctgctggcctggttcctacag
gaaaacaagaaggagtgttttgccgcctgccttttctcctgctacgacctgctgcggcct
gacgtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggagtacctctccaaggtagacaagcttgaaacctcagagtcccta
agaaaagaagaggagcaggcgacagaaacgcaacccatcgtctatggaacgccccagctg
atgctgacggcaggccccagcgtaccagtggccccgcagcaggcgtacggctatggctac
caggcgcctgcaggcttcgttccaccagcggctcagccgggcttcggctacggcatgtga
DBGET
integrated database retrieval system
