Cyprinodon variegatus (sheepshead minnow): 107104735
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Entry
107104735 CDS
T06110
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107104735
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107104735
Factors involved in mRNA localization
Other mRNA localization factors
107104735
mRNA cycle factors
Stress granule specific factors
107104735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
107104735
NCBI-ProteinID:
XP_015260305
Ensembl:
ENSCVAG00000008490
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNSP
ASRNTFHKVTIPIPEDLREICATDGIHKDFRKAIEANCIFYSAQTNELVVLSTNETTIKR
ATLLSDMHFRSIRTKLILMSRNEEATKHLETSKQLAAAYQEEVKVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEKSCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTASSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRTGGPAGDREKGYTTDE
SSNSLHASRTYGGRGRGRRPSNNQYSGYGTNSELSNASESEDVNDRETRPRGISGDERGS
RRGGRGRGTNSGRGRGGPAAKPSNSISSVLRDPDSNPYSLLEGEAELADADLSEGMGGDR
HRRSRRRRNDQEPSVIDAAGESDNQAGPSENGLDDEARPQRRNRSRRRRNRGSRPEGGSA
SRDRQPAESVTVADYISRPESQSRQNLPQKENQTGPELKENGTSSKEERTPSKRSPSKET
PTLVNGVS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaggttcgcggctcaaatggggccttttacaagggttttatc
aaagatgtccatgaagactcactcactattgtatttgaaaacaactggcagcctgagaga
cagctgcccttcagcgacgtgcggctgcctccacctgccgactaccacaaggatatcggt
gaaggcgaggaggtggaggtatactccagagccaatgaacaggagccatgtgggtggtgg
ctggcacgggtcagaatgatgaagggggagttctacgtaatcgaatatgcagcgtgtgat
gccacatataatgagattgtcacgtcagagcgcatcaggcctctcaaccccaacagtcct
gcctcccgaaacactttccacaaggtcaccatccccatcccagaagacctgagggaaata
tgtgcaactgacgggattcacaaggacttcagaaaagcaattgaagctaactgcatcttc
tatagcgctcaaacaaatgagctcgttgttctgtccacaaatgagacgaccataaagcgt
gcaacacttttgagtgacatgcatttccgcagcatccgtaccaaactcatcctaatgtcc
cgcaacgaagaagccactaaacatttggagaccagtaagcaactggcggcagcataccaa
gaagaggtcaaagtcagggaggacctaatgggtctcgccatcggctcccatggtgccaac
atccagcaggccagaaaggtgcctggtgttacagccattgagctggaagagaaaagttgt
acttttaggatctatggagagacccctgaggctgtgaagcaagctagagaatatcttgag
ttcaaagaagactactttcaggtacccaggaaccttgtaggcaaagtcatcggcaagaac
ggcaaagtcattcaggagatagtggacaagtctggtgtggtccgcgtccgcatcgaggga
gacaacgacaaaaagctcccccgtgaggaggtaggcaggcagggggctggcagagacgac
actgccagcagcaaagagggcatggttccctttgtgtttgttggaactaaggagaacatc
agcaatgctcaagccttgttggagtaccatgtttcttacctccaggaagtggagcagctg
cgcctcgagcgtctccagatagacgagcaactccgtcaaattggggtgggataccgtgct
cctcccagccggaccggaggtcccgcaggtgaccgggagaaaggctacactacagatgag
agcagcaactcactccatgcatcccgtacctatggcgggcgcggcagaggacgaaggccc
tctaacaaccagtattccggatacggcaccaactctgaattgtcaaacgcttctgagtca
gaggatgttaatgatcgagagacgagaccccgcggcatcagtggggatgagagaggctcc
agacggggtggcaggggccgaggtaccaactcaggacgagggcgtgggggccctgctgcc
aaaccttccaattctatcagctcagttctaagggatccagacagtaacccatactctctg
ctggagggagaggcagagcttgcagatgctgaccttagtgagggcatgggaggggaccgc
cacagacgatcccgccgtcgacgcaacgatcaagagcctagtgtgatagacgctgctgga
gagtcggataatcaggccggccccagtgagaacggactagatgatgaagctcgacctcag
cgccgaaaccggagccgccgccgccggaaccgtggcagccgcccagagggagggtcagct
agccgtgacagacagccagcagaaagtgtgaccgttgctgactacatatcccgtcctgag
tcccagagcagacagaatctgccccagaaggagaaccaaactggacctgaactcaaggag
aacggaaccagctcaaaggaggagcggacgccatcaaagcgttctccgagcaaggagacg
ccgactttggtcaacggggtctcataa
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integrated database retrieval system
