Cyprinodon variegatus (sheepshead minnow): 107104794
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Entry
107104794 CDS
T06110
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107104794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107104794
03036 Chromosome and associated proteins [BR:
cvg03036
]
107104794
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107104794
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107104794
PBAF complex
107104794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
Motif
Other DBs
NCBI-GeneID:
107104794
NCBI-ProteinID:
XP_015260369
Ensembl:
ENSCVAG00000006436
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPSTPGFVGYNPYSHLAYNNLRLGGSSGGSSRNSSGITVPKP
PKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNE
YEAEKIEYTDSLKAYHNSPAYLAYVNAKNRAEAAMEEESRQRQSRLEKGEPYMSIQPAED
PDDYDDGFSVKHSAAARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMVHQ
RKLEAELLQIEDRHQEKKRRFLETTDSFNTELKRLCSLKVEVDMEKLAAEMAAAEEAARR
RAEEREREAAEQAEKAAQQQQEAAANKAAEQSGADSASGTKEEEKPTPMETADEAAPAET
LSDQQSAPPPPSDPPSPPSDNAGLLPEPPRESSTPVSSAPSDDSNSMPPPVDGNPAATAP
SDPSGGQEAANTAAAAPPPSLDDVAPPPPILLPNQSSQQYDM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgcccatcctacgctccacctcccccccctgccccaaccacacaaatgcct
tccaccccagggtttgtgggctacaacccttacagccatctggcctacaacaacctccgg
ctgggagggagctccggaggctccagcaggaactcctcagggatcaccgtcccaaagcct
cccaaacctccagacaagcctctgatgccatacatgcggtacagccggaaggtaagcagg
aaggtatgggaccaggtgaaggcctccaacccagacctgaagctgtgggagatcgggaag
atcattggaggaatgtggcgggacctgaccgacgaggagaagcaggactacctgaatgag
tacgaagctgaaaagatcgagtacacggactctctgaaagcttatcacaactctccagct
tacttagcttatgtgaacgctaagaaccgcgccgaggcggccatggaggaggagagccgg
cagaggcagagccgtttggagaaaggggagccatacatgagcattcagcctgctgaagac
cctgatgactacgacgacggcttttcagtgaagcactctgcagccgctcgcttccagagg
aaccatcggctcatcagcgacatcctcagcgagatcgtcgtccccgacgtccgctctgtg
gtcaccaccgcccgcatgcaggtcctcaagagacaggtccagtcgctgatggtgcatcag
aggaagctggaagcagaacttctgcagattgaagaccgccaccaagaaaagaaacgccgc
ttcctggaaactactgattccttcaacactgagctgaagaggctgtgcagcctgaaggtg
gaggtggacatggagaagctggcagcagagatggccgctgcagaggaggctgcgaggcgg
cgagccgaggagcgggagcgcgaggccgccgagcaggcggagaaagcggcgcagcaacaa
caggaggccgctgctaacaaagctgccgagcagagcggcgcggactccgcctcagggacc
aaagaggaagagaagcccacgccgatggagacggcagacgaagcggcgcctgcagagacc
ctctcggaccaacagtccgctccccctcctccgtctgaccccccctcccccccttccgat
aacgcaggcctcctccccgagcccccaagggagagcagcactcctgtgagcagcgccccc
agtgacgacagcaacagcatgccccctccggtggatggaaaccccgcagctacggcgccg
tcggacccctcagggggacaggaagcggctaacactgcagctgcagcgccccctccttct
ttggatgacgtggcccccccaccaccaatacttctccctaaccagagcagccagcagtac
gacatgtga
DBGET
integrated database retrieval system
