Cyprinodon variegatus (sheepshead minnow): 107105069
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Entry
107105069 CDS
T06110
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107105069
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
107105069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Mucin-like
RHG20_PH
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
107105069
NCBI-ProteinID:
XP_015260672
LinkDB
All DBs
Position
Unknown
AA seq
2239 aa
AA seq
DB search
MALRGQTANYLFKPAQPDSESLDRCIQKALAGLYPPFHATSPTLLCQVLSVVDSCFRGDG
LRYLIHFLLPAKNLLQNLQQDACSPFSGLLFRHEGWPLCIHEKIVVQLCPLDQHLLHPGD
FYLLVSPAASAAHSTSCRNSTSCRNSTSCRNSTSCRNSISCRNSISTNPRLLLCSVSAGS
RHVQQQEVPVEALTSLFSMAWLDSVNRERERRGVSKLERCILSVHGDVFRVPWEDVVYPQ
FINQPRTTSNPEGESSVKDKNDPNPSEKDVKLLPLPIRPDQSKASVDDEDSEGEYVELTE
LPRFSPQKGSLTQSISLQHRTRTTTHSHTHSWSCSEVSTHTLQCSKLLEENFSQDSSGDL
HRTPEVKEQTKATIPEGSHDGPPEPESCTLDGEGKEGQEEVCDEEQGQEEEKESKNINKD
EEEEGEEGERNEAQLEDVEEEVKCLVEKEEVSKVGQKEEEEVEKKETGFEEYIDIDFYSE
SNKQQKYSEDSGTLMEKLNLQHSYCKNMNGNKHPEGFYCENITEKTKLENSYCEHVGQTT
QTEDFQLKRFVEREHSTECYFENITIKKSNLADSVSENQTQNTDYSDSISHAQSEDSYFE
IGTLHRPLNELERLNSGQAFPGEPETLHDSENQKPHEEYNSEKPAQPEDSNSEKQHKDFC
SDKYMDSYFEKQKPLEDSYSETQMQPEDSCSEKSVDFFSKNQRQLENTFDNEKQPENSYS
EKQPEDSYSEKHQHVGYVFEKQQKLDYTSNNQKQLEDSYCKKHVDFYSEKQQHVDSYSKK
HEDSNAENQIELEESYSEHRPKLEISYSENLFVDSISENQIQPGNFNTAKQTSENSNLES
MTQVQVKCCFSETQTQAKDLYSEKQKDSYSVKQNEDCYFQKKTDNFFPVKETKDSCCEKQ
TEDSFCGNQLEDSYSVWQNHPVDSCSEKQNQLVDSCYEKQNKPEDSYSEKEKQPEDSYSV
REKETEDSDSEKQNQLVDSYYEKQNKPEDSYSEKEKETEDSDSEKQNQLVDSYCEKQNQP
ECSCSEKEKRTEESFRTVNDSCSEDPPQSEEKESEEAHPVLNEGQENKYEEENKEEVEKQ
VCVKNAGRGLAEHQTKGSSCECPPIQLNISADSGPKEPEKPSAPSRSFQSSFHSLLLRSG
AVCLPGTRDRGGRTLLTVSTSNPIWLNPDCDHEELLSILLYYTSTLSTEARARGLTVLVD
ARSAAPPSVLFSALWTLQEDASVSIHAVLILASKGWLHVDQAAPVQVEVLSSLKSLQRHV
ELQQLPAEFGGSFGFSQSSWISFRSRVEQLTQQCTSVINLLQETISNLQRTPLPAAAEVR
NHPAAASLLVCSGNHQFSVIQTQELSFIVEFRNLETGFNQVKAWLDEVGELRLKALNEPA
DSLELLNSKQEEFKEFVTTAYDRCKQGEALLSRLERWEDVSSPDLHAYEVKVHSFWAQLQ
DFSQRVKGTGQNLERAVQLYRFLDQAYGWALEGMRQLAGLSMEDCMLPDKCRAVIGFLED
YQSNHPPIPESRFQRMKAEAGELRGESGLRQWSFAWSKCQEAKKMFDRKMEAAVSTRDSA
HRHRSNSVVSTSSASSRKSGLWGILETSSGEEPGASPSPPAPQRKPFYRYLLRSSSTYEE
SERRDVCSPIANHSSPRFTSPSSPSFPPSSSSSSRRQQLRKTQSFDSPSLTSDISRCGAN
PRTLSEPPRRGNTGVFIRGLEVSSTEAADRTLCPRTPVPGWAGPRSPETPGTPAGDGRPR
GSKLRHIVEEMVTTERDYVRSLRFIIHHYFPEMERADLPQDLRGKRSIIFGNLEKLLDFH
SQFFLKELEACWKHPLRVPHCFLRHQEQFSLYALYSKNKPKSDALLAAHGHAFFRRKQLQ
LGDKLDLSSYLLKPIQRMSKYALLLSDLIKEVDVAQEAELSALQDATNMVKFQLRHGNDL
LAMDAIRDCDVNLKEQGQLIRQDEFTVCSGRRKCQRHVFLFEDLLLFSKPKKMEGGLDVF
IYKHSFKTADVGLTESSGDDGLRFEIWFRRRTAKNQTFVLQAATAGIKHAWTGDIARILW
TQAARNKEVRLKELLSMGVGSKPFMDIQPSDAAISDRAVHYIMKARGARTRASIAVSAFD
HAHPFKRGAPAEPPASGPSSSSLLGPLNLHMFSQSSSSSAPPAAASFGSSCIEEDEQEHE
TSSQPSMTTESSGSSSHCLSGSTGSDSGCVSSHLREALQEEPSALCPTSSSSSSSSSTKQ
HRRLTSAEAAAVVGAATIV
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcggggacagacggctaattatctgttcaaacctgcacaaccggactctgag
tctttggatcgctgcatccagaaagctctggcaggcctctacccgcccttccacgccacg
tctcccacccttctgtgtcaggtcctcagcgtagtggacagctgcttcagaggagacggc
cttcgctacctcatccacttcctgcttcctgcaaagaacctactgcagaacctccagcag
gatgcctgctctccgttctctggtctgctgttccgccatgaaggctggcctctctgcatc
catgagaagatagttgttcagctttgtcctttggaccagcacctcctccatccaggagac
ttttacctgctggtttctcctgctgcttctgcagcacacagcacctcctgcaggaacagc
acctcctgcaggaacagcacctcctgcaggaacagcacctcctgcaggaacagcatctcc
tgcaggaacagcatctccaccaacccccgtctgctcctgtgcagcgtttctgcaggcagt
cgtcatgtccagcagcaggaggtgccggtcgaggctctgacgtcgctctttagcatggca
tggctggactctgtgaacagggagagagagcgacgaggggtctccaagctggagcggtgc
atcctctctgtccacggagacgtcttcagggtcccctgggaggacgtggtttaccctcag
ttcatcaatcagccacggaccacctcaaacccagagggggagtcctctgtgaaggacaag
aatgatccaaacccctcagagaaggacgtgaagctcctccctctcccaatcagacccgac
caatcaaaagcaagtgttgatgatgaagactctgagggggagtatgtggagctgacagag
ctgcctcggttctccccacagaaaggatccctgacccagtctatcagcctgcagcacaga
accaggacaaccacacacagtcatacgcactcctggtcctgctctgaggtcagcacacac
actctgcaatgctccaaactcctggaggagaacttcagccaggattcatctggagatctc
cacagaactcctgaggtgaaggagcaaacaaaagctaccatcccagaagggagccatgac
gggccccctgaacctgaaagctgcacgctggatggagaaggtaaggaggggcaagaagag
gtttgtgatgaggagcagggacaggaggaagaaaaggagtcaaagaatataaacaaagat
gaggaggaggagggtgaggaaggagagagaaatgaagcacagttagaggatgtagaagaa
gaggttaagtgtctggtagagaaggaggaagtgagtaaagttggtcagaaggaagaagag
gaagttgaaaagaaagagacaggatttgaagagtacatagatatagacttttactctgaa
agtaacaaacaacaaaagtactctgaggattctggaactttaatggaaaaattaaacctg
cagcactcttattgtaaaaacatgaatggaaataaacacccagaaggcttttactgtgaa
aatatcacagaaaaaacaaaactggagaactcttattgtgaacatgtgggacaaacaaca
caaaccgaggacttccagcttaaacgtttcgtagaaagagaacattctactgagtgttat
tttgaaaatataaccattaaaaaatctaatctggccgattcagtttcagaaaatcagaca
cagaacactgactactctgatagtatatcccatgctcagtctgaagactcttattttgaa
atcgggacccttcatagacccttgaatgagttagagaggttaaattctggacaagctttt
cctggggagccggaaactttacatgattctgaaaatcagaaaccacatgaggaatataat
tctgaaaaaccagcacaacccgaagattccaattctgaaaagcaacacaaggatttttgt
tctgacaaatatatggactcttattttgaaaaacaaaagccccttgaggactcttattct
gaaactcagatgcaacctgaagactcttgttctgaaaaaagtgttgattttttttctaaa
aatcaaagacagttggaaaacacttttgataatgaaaaacaacctgaaaactcttattct
gaaaagcaacctgaagactcttattctgaaaaacatcaacatgtgggttatgtgtttgaa
aaacagcaaaagttggactatacttctaataatcaaaaacaactggaagactcttattgt
aaaaaacatgtggacttttattctgaaaagcaacaacatgtggactcttattctaagaaa
catgaggactctaatgctgaaaatcagatagaacttgaggaatcttattctgaacatcga
ccaaaactagaaatctcttattctgaaaatctatttgtggactctatttctgaaaatcag
atccagcctggtaactttaatactgcaaagcaaacatctgagaactctaatttagaaagt
atgacacaagtacaagttaagtgctgtttttctgaaacgcaaacacaagctaaggacttg
tattctgaaaaacaaaaagactcgtattctgttaaacaaaatgaggactgttattttcag
aaaaaaacagacaacttttttcctgtaaaagaaactaaggactcttgttgtgaaaaacaa
actgaggactccttttgtggaaaccaactggaggactcttattctgtttggcaaaaccat
ccagtagactcttgttctgaaaaacaaaaccaacttgtggactcttgttatgaaaagcaa
aacaagccggaggactcttattctgaaaaagaaaagcagcctgaggactcttattctgta
agagaaaaggaaactgaggactctgattctgaaaaacaaaaccaacttgtggactcttat
tatgaaaagcaaaacaagccagaggactcttattctgaaaaagaaaaggaaactgaggac
tctgattctgaaaaacaaaaccaacttgtggactcttattgtgaaaaacaaaaccagcct
gagtgctcttgttctgagaaagaaaagcgaaccgaggagtctttcagaactgtaaatgac
tcatgttctgaagatcctccacaatctgaggaaaaagaatcagaagaagctcatcctgtg
ttgaatgaaggacaggaaaataaatatgaagaggagaacaaagaggaagtggagaagcag
gtctgtgtcaagaatgctggaagaggattggcagagcatcagacgaaaggttctagctgc
gaatgtcccccaatccagttaaacatcagcgctgactcaggtccaaaggaaccagaaaaa
ccatcagctccatcacggtctttccagtccagcttccacagcttgttgctgaggtctgga
gctgtgtgtctgcctggaaccagagacagaggaggacgaacgctgctcaccgtctccacc
tccaaccccatctggctgaacccagactgtgaccatgaggagctgctcagcatcctgctc
tactacacctctaccctcagtacggaggctcgagcaagggggctgacggtgttggtggat
gcccgcagtgctgctcctccttctgtcctcttctctgccctctggactctgcaggaggac
gcgtctgtctccatccacgctgtgctaatcctggctagcaaaggctggctgcatgtggac
caagctgctcctgtacaggtggaggtgctgagctctctgaagtctctgcagagacacgtg
gagctccagcagcttcctgcagagtttggaggatcgtttggcttcagtcagagcagctgg
atcagcttcagatcgagggtcgagcagctaacccaacagtgcacaagcgtcattaatctg
ctgcaggaaaccatcagcaatctgcagaggacgccgttacctgctgctgctgaggtaaga
aaccatccagctgctgcgtctctgctggtttgctctgggaaccatcaattctcagtcatc
cagacgcaggagctcagcttcatcgtcgagttcaggaacctggagacgggcttcaaccag
gtgaaggcgtggctggacgaggtcggtgagctccgtctgaaggccctgaacgaacctgca
gattccctggagcttctgaacagcaaacaggaggagttcaaggagttcgtcaccacggct
tacgaccgctgtaaacaaggtgaggctctgctgtcccgtctagagcgctgggaggacgtc
tcttcaccggacctccacgcctacgaggtcaaagttcactcattctgggctcagctgcag
gacttctctcagcgggtcaaaggaaccgggcagaacttggagcgggccgtgcagctgtac
cgcttcctggatcaggcctatggctgggcgttggagggaatgcgtcagctggctggactc
tccatggaggactgcatgctgccagacaaatgccgcgctgtgattggcttcctggaagac
taccagtccaatcacccaccaatcccagagagccgtttccagaggatgaaggcggaagca
ggcgagctgcggggcgagagcggcctccgccagtggagcttcgcctggtccaagtgtcag
gaggccaagaagatgtttgacaggaagatggaggcggcggtcagcacacgagactccgcc
cacaggcaccgctccaactctgttgtcagcacaagctccgcctcctccaggaagtcaggg
ctgtgggggattcttgagacctcctccggagaggagcccggcgcctccccctctccaccc
gccccccagagaaaacctttctatcgctatctgctccgaagctcctccacctacgaggag
tcagagcggcgggacgtctgctcccccatcgccaaccactcctcccccaggttcacctcc
ccctcctcccccagcttccctccctcctcctcctcctcctctaggaggcagcagctgagg
aagacgcagagcttcgactccccgtcgctaacttctgacatttcccggtgcggcgccaat
ccacgcaccctcagcgagccgccgcgccgagggaacacgggcgtgttcatccgcggcctg
gaggtcagcagcaccgaggcggccgatcggaccctgtgtcccagaacgccggttcctggc
tgggcgggccctcggagcccggagacacctgggaccccggcaggagacggccgcccccga
ggaagtaaattacgacacatcgtagaggagatggtgaccacggagcgcgactacgtccgc
tcgctgcgcttcatcatccaccattacttcccagagatggagcgggccgaccttcctcag
gacctgagagggaaacgctccatcatcttcgggaacctggagaagctgctggacttccac
agccagttcttcctgaaggagctggaggcgtgctggaagcatccgctgagggtgcctcac
tgcttcctcagacaccaggagcagttcagcctctacgccctttacagcaagaacaaaccc
aaatctgacgcgctgctggctgctcacggccacgccttcttcaggaggaagcagctgcag
ctgggtgataagctggacctgtcgtcgtacctgctgaagcccatccagaggatgagtaaa
tacgccctgctcctctctgacctcatcaaagaggtggacgtggctcaggaggcggagcta
agcgccctgcaggacgccaccaacatggtcaaattccaacttcgccatggcaacgacctg
ctggccatggacgccatcagagactgtgacgtgaacctgaaggagcagggtcagctgatc
cggcaggacgagttcacggtctgcagcggcaggaggaaatgtcagcgtcacgtcttcctc
ttcgaggacctgcttctgttcagcaaacccaaaaagatggagggaggtctggacgtcttc
atctacaaacactccttcaagaccgcagacgtgggtctgaccgagtccagcggggacgac
gggctcaggttcgagatctggttcaggaggaggacggccaagaaccagaccttcgtcctg
caggctgcgacggcaggcatcaaacacgcctggaccggtgacatcgcccggatcctgtgg
acccaggccgcccgcaacaaagaggtgcgtctgaaggagctgctgtcgatgggcgtcggc
agcaaacccttcatggacatccagcccagcgacgccgccatcagcgaccgcgccgttcac
tacatcatgaaggccagaggagccagaacccgcgcctccatcgccgtctccgcctttgac
cacgcccacccctttaagagaggcgctccagctgagccgccggcatcaggaccgtcctcc
tccagcctgctgggcccgctcaacctgcacatgttcagccagtcctcctcctcctccgct
cctcctgccgccgcctcctttggctcttcgtgcatcgaggaagatgagcaggaacatgag
accagcagtcagccctccatgaccacagaaagttctggctcctcctctcactgcctctct
ggctccacgggctccgacagcggctgtgtctcctcccacctccgagaggcgctgcaggag
gaacccagcgccctctgtcccacttcctcatcatcctcatcatcttcctccaccaaacag
cacaggagactcacctcagctgaagctgctgcagtcgtcggcgccgccacgatcgtctga
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