Chromobacterium violaceum: CV_0092
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Entry
CV_0092 CDS
T00147
Name
(GenBank) probable ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cvi
Chromobacterium violaceum
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvi03016
]
CV_0092
Enzymes [BR:
cvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CV_0092
Transfer RNA biogenesis [BR:
cvi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CV_0092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AAQ57771
LNCC_Brazil:
CV0092
UniProt:
Q7P1X0
LinkDB
All DBs
Position
103148..105022
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AA seq
624 aa
AA seq
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MNVFYEESGSFKVGSIVSRSDASLQVDTQHGKRAKIKSANVFLEFSSPLADFLPSADKLA
ADIDLDFLWECSPDDEFGYQDLAADYFGHQPSAAEAAALISRLHGAPMYFYKKGKGRYKK
APQEALQAALAGVERKKREQEQIDGWVAELKAGALPEAIRSQLMQLLWKPDKNALEFKAF
DQASRELNLPPQRLADKVGGIPSVPDYLMAGFLMEYFPKGAGFGKYAPPAELPELPVAAV
RAFSIDDANTTEIDDALSVEDLPNGNKRVGIHIAAPTLGVPQDSDIEKMMLSRLSTAYFP
GDKITMLPDDVVQAFTLQEGRDCPAFSLYVEVTPAFEPVAFENRIERVPVAANLRHAELE
QVFNEETLANDPGVDYPFKRELTWLWQFAEALEKRRGKYDPTRPAQHDYNIDVVDGRVSI
TIRKRGAPMDKLVSELMILANSEWGRMLAEADIPAMYRAQSMGKVRMTTRPEPHIGLGVA
QYAWSTSPLRRASDFINQRQLAAMIRGEKPQFAQGDAMLFAILRDFDATYGAYLSFQDKM
EHYWCLKYLLQENITEPTAAVIKEDLVRIDGLPLRLRIPGLPELARGDRVQLSVVKVDLL
TQEVELRYTGRLDHVEDDLEDEES
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttttacgaagagagcggcagtttcaaggttggcagcattgtgtcgcgcagc
gacgccagcctgcaggtggacacccagcacggcaagcgcgccaagatcaagagcgccaac
gtctttctggagtttagctccccgttggcggattttctgccgtcggcggacaagctggcc
gcggatatcgacctggacttcctgtgggagtgcagccccgacgacgagttcggctaccag
gacctggccgccgattatttcggccatcagccctccgccgccgaggccgccgcgctgatc
agccggctgcacggcgcgccgatgtacttctacaagaagggcaagggccgttacaagaag
gcgccgcaggaggcgctgcaggccgcgctggccggcgtcgagcgcaagaagcgcgagcag
gagcagatagacggctgggtggctgaattgaaagccggcgcgctgccggaagccatccgt
tcgcagctgatgcagctcttgtggaagcccgacaagaacgcgctggaattcaaggctttc
gaccaggccagccgcgagctgaacctgccgccgcagcgcctcgcggacaaggtgggcggc
attccgtcggtgccggactacctgatggccggtttcctgatggagtacttccccaagggc
gccggcttcggcaagtacgcgccgccggccgagctgccggaactgccggtggccgcggtg
cgcgcgttctcgatcgacgacgccaacaccaccgagatcgacgacgcgctgtcggtcgag
gacctgccgaacggcaacaagcgcgtcggcatccacatcgccgcgccgacgctgggcgtg
ccgcaggattccgacatcgagaaaatgatgctgtcgcgcctgtccaccgcctatttcccc
ggcgacaagatcaccatgctgccggacgacgtggtgcaggccttcacgctgcaggaaggc
cgcgactgcccggcattctcgctgtacgtcgaagtgacgccggcattcgagccggtggcg
ttcgagaaccgcatcgagagagtgccggtggccgccaacctgcgccatgccgagctggaa
caggtgttcaacgaggagacgctggccaacgatccgggcgtcgactacccgttcaagcgc
gagctgacctggctgtggcaattcgccgaggcgctggagaagcgccgcggcaagtacgac
cccacccgtccggcacagcacgactacaacatcgacgtcgtcgacggccgcgtgtccatc
accatccgcaagcgcggcgcgccgatggacaaactggtgtccgagctgatgatcctggcc
aacagcgagtggggccggatgctggccgaggccgacatcccggcgatgtaccgcgcgcag
agcatgggcaaggtgcggatgaccacccgccccgagccgcacatcggcctgggcgtcgcc
cagtacgcgtggagcacgtcgccgctgcgccgcgccagcgacttcatcaaccagcgccag
ctggcggcgatgatacgcggcgagaagccgcagttcgcccagggcgacgcgatgctgttc
gccatcctgcgcgacttcgacgccacttacggcgcctatctgtcgttccaggacaagatg
gagcactactggtgcctgaagtatctgctgcaggaaaacatcaccgagccgaccgccgcc
gtgatcaaggaagacctggtgcgcatcgacggcctgccgctgaggctgcgcatccccggc
ctgccggaactggcgcgcggcgaccgcgtgcagctgtcggtggtcaaggtggacctgctg
acgcaggaggtggagctgcgctacaccggccgcctcgaccacgtcgaggacgacctggag
gacgaggaaagctga
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