Chromobacterium violaceum: CV_0232
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Entry
CV_0232 CDS
T00147
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CV_0232 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_0232 (ung)
Enzymes [BR:
cvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CV_0232 (ung)
DNA repair and recombination proteins [BR:
cvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CV_0232 (ung)
Prokaryotic type
CV_0232 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAQ57911
LNCC_Brazil:
CV0232
UniProt:
Q7P1I1
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All DBs
Position
complement(241078..241794)
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AA seq
238 aa
AA seq
DB search
MTYLAPALARIHPDWEAVLDQAAVAARLAEIDRLLVLQQQDGKTLFPPPPQVFNALAFAA
PADVKVVILGQDPYHGDGEAMGLSFSVPDGARVPPSLRNIYKELAADLGLGVPASGDLTH
WAQQGVLLLNSVLTVERDKAGSHGKLGWQTVSDALIDAVNRDNPGCVFLLWGNWAQTKAE
RIDASRHLVLTAAHPSPLSASRGFHGCRHFSQVNAWLIARGRQPVRWATAPAAQSCLF
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgacctacctcgcccccgccctcgcccgcatccatcccgactgggaagcggtattggac
caagccgccgtcgccgcccgcctggccgaaatcgaccgcctgctggtcttgcagcagcag
gacggcaagacgctgttcccgccgccgccccaggtgttcaacgcgctggctttcgccgcg
ccggccgacgtcaaggtggtgatcctgggccaggatccgtaccacggcgacggcgaggcg
atgggcctgtcgttctcggtgccggacggcgcgcgcgtgccgccgtccctgcgcaacatc
tacaaggagctggcggccgatctcggcctcggcgtgcccgccagcggcgatctcacccac
tgggcgcaacagggcgtgctgctgctcaacagcgtgctgaccgtcgagcgggacaaggcc
ggcagccacggcaagctgggctggcaaacggtcagcgacgcgctgatcgacgcggtgaac
cgcgacaaccccggctgcgtgttcctgctgtggggcaactgggcgcagaccaaggccgaa
cgcatcgacgcctcccgccacctggtgctgaccgccgcccacccgtcgccgctgtcggcc
agccgcggtttccacggctgccgccacttctcccaggtcaacgcctggctgatcgcccgc
ggccgccagccggtgcgctgggcgacggcccccgccgcgcaaagctgcctgttctga
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