Chromobacterium violaceum: CV_0507
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Entry
CV_0507 CDS
T00147
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03030
DNA replication
cvi03430
Mismatch repair
cvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CV_0507 (holA)
03430 Mismatch repair
CV_0507 (holA)
03440 Homologous recombination
CV_0507 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvi03032
]
CV_0507 (holA)
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_0507 (holA)
Enzymes [BR:
cvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CV_0507 (holA)
DNA replication proteins [BR:
cvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CV_0507 (holA)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CV_0507 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AAQ58184
LNCC_Brazil:
CV0507
UniProt:
Q7P0Q9
LinkDB
All DBs
Position
533461..534402
Genome browser
AA seq
313 aa
AA seq
DB search
MVHGEEALLALEAADAVRAAARAAGYLEREVLTVESGFDWSQLTDSMSSVSLFASLKLLE
IRIPGGKPGTEGVEALQRLAADPPQDTVTLITLPKLDKAQQQSKWFTALDKIAQVVEARP
VGRAELPGWISRRLKAQGQQLGADALAFFVDRVEGNLLAARQEVDKLALLYPKGELSLAD
LQAAVANVARFDVFQLSEAWLAGDTPRLTRMLDGLMAEGEAPVLVLWSLAEDVRMLLKLR
QGLKDGRQPRDMARELRLWGEKQKLAEPALRRIGPRKLMAALSECARIDRQIKGVEPGEP
WQTMRALATQLAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ctggtgcacggcgaggaggcgttgctggcgctggaagctgccgatgccgtccgcgccgcc
gcccgcgcggccggctatctggagcgcgaggtgttgaccgtggaaagcggcttcgactgg
tcgcaactgaccgactcgatgtccagcgtatcgctgttcgcttcgctgaagctgctggaa
atccgcattcccggcggcaagccgggcaccgagggcgtggaggccttgcagcgcctggcc
gctgatccgccgcaggacacggtgaccctgatcacgctgcccaagctggacaaggcgcag
cagcagagcaagtggttcaccgcgctggacaagatcgcccaggtggtggaggcgcgcccg
gtgggccgcgccgagcttcccggctggatctcccgccggctgaaggcccagggccagcag
cttggcgccgacgcgctggcgttcttcgtcgaccgggtggagggcaatctgctggccgcc
cggcaggaggtggacaagctggctttgctctatcccaagggcgagttgagcctggccgat
ctgcaggcggcggtggccaatgtcgcccgcttcgacgtgttccagctgtccgaagcctgg
ctggccggcgacacgccgagactgacgcggatgctggacggcctgatggccgagggcgag
gcgccggtgctggtgctgtggtcgctggccgaggacgtgcgcatgctgctcaagctgcgc
cagggcctgaaggacggccgccagccgcgcgacatggcgcgcgagctcaggctgtggggc
gagaagcagaaactggccgagccggcgctgcgtcgcatcggcccgcgcaagctgatggcc
gcgctgtccgagtgcgcgcgcatcgaccgccagatcaagggcgtcgagcccggcgagcca
tggcagacgatgcgggcgctggcgacgcagctggccgcctga
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