Chromobacterium violaceum: CV_0779
Help
Entry
CV_0779 CDS
T00147
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03030
DNA replication
cvi03410
Base excision repair
cvi03420
Nucleotide excision repair
cvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CV_0779 (polA)
03410 Base excision repair
CV_0779 (polA)
03420 Nucleotide excision repair
CV_0779 (polA)
03440 Homologous recombination
CV_0779 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvi03032
]
CV_0779 (polA)
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_0779 (polA)
Enzymes [BR:
cvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CV_0779 (polA)
DNA replication proteins [BR:
cvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CV_0779 (polA)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CV_0779 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CV_0779 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AAQ58455
LNCC_Brazil:
CV0779
UniProt:
Q7NZZ0
LinkDB
All DBs
Position
802574..805360
Genome browser
AA seq
928 aa
AA seq
DB search
MKTLLLIDGSSYLYRAFHAMPDLRSPDGRPVGAVYGMVNMLRRLEKEVEFDYSACVFDAK
GKTFRDDLYPEYKANRPSMPEELASQITAVHDVVQASGWPMLVVPGVEADDVIGTLARLG
AAAGMKVIVSTGDKDMAQLVTPDVTLVNTMTNELLDEAGVKEKFGVPPSLIIDYLTLIGD
KVDNVPGVDKCGPKTAVKWLEEYGSLDAIIAQAGSVGGKVGENLRAALDWLPMGRRLITI
DCDVDLEADLPHGLPGLQHGQKDKPRLAELFQDLGFRTFYREVTEGAEMPAVAQRGEDAP
RGGEAQGDMFAEPAAPAAPPALSAGALERHYETILTEAQLDAWLARLMAAKVVSFDTETT
SLDPMQARIVGVSFSVEAGHAAYLPLEHHYAGAPQQLPLEAALAKLKPWLEDASKKKCGQ
NLKYDCHVLANHGIALAGIADDSMLASYVLESHQRHNMDDLARRHLGENTVSYEEICGKG
AKQIGFSEVDVDIAANYAAEDADITLRLNQFFAGQLFGDLEKVYRDIELPVAEVLFKMER
HGVLIDRDKLAAQSHQLGSQMLELEQRAYELAGQPFNLNSPKQLQEILFGKLAIPTKGVK
KTPSGGYSTDESVLEQLALDHPLPKCILEYRGLAKLKSTYTDKLPTLIYPQTGRVHTTYA
QAVAITGRLASNDPNLQNIPVRTAEGRRVREAFIAPAGWQIVSADYSQIELRIMAHLSDD
EGMLKAFASGEDIHRATAAEVFGVELAAVTSDQRRAAKAINFGLIYGMSAFGLAAQLDIE
RSAAQQYIDRYFMRYPGVAEYMQATREKAREQGYVETVFGRRLYLPDIKLSNPGRRAGAE
RAAINAPMQGTAADLIKLAMIAVQDWLERDGLQSKLIMQVHDELVLEVPQAELEQVKRRL
PEIMAGAAELKVPLLAEVGAGDSWEAAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattgttattgatcgacggctcttcttatttgtaccgcgcctttcacgcgatg
cccgatttgcgttctccggatggccgcccggtgggggctgtctatggcatggtcaacatg
ctcaggcggctggagaaagaggttgagttcgattatagcgcctgcgtcttcgacgcgaag
ggcaagactttccgcgacgacctgtaccccgaatacaaggccaaccgcccgtcgatgccc
gaggagcttgcttcccagattacggcggtccacgatgtggtgcaagcttccggctggccg
atgctggtggtgccgggcgtggaggccgacgacgtgatcggcacgctggcgcgcctgggg
gcggcggccggcatgaaggtgatcgtctccaccggcgacaaggacatggcgcagctggtg
acgccggacgtcaccttggtcaacaccatgaccaacgagttgctggacgaggccggcgtg
aaggagaagttcggcgtgccgcccagcctgatcatcgactacctgaccctgatcggcgac
aaggtggacaacgtgcccggcgtcgacaagtgcgggccgaagaccgcggtcaaatggctg
gaagagtacggcagcctggacgccatcatcgcccaggcgggcagcgtcggcggcaaggtc
ggcgagaacctgcgcgcggcgctggactggctgccgatgggcaggcggctgatcaccatc
gattgcgacgtcgatctggaggcagacctgccgcacggcttgccgggcctgcagcatggc
cagaaggacaagccgcggctggccgaattgttccaggatctgggcttccgcaccttctac
cgcgaggtgaccgagggtgcggaaatgccggccgtcgcgcaacgcggggaggacgcgccg
cgtggcggcgaggcacagggcgacatgttcgccgaaccggccgcgcctgcggcaccgcca
gccctgtccgcaggcgcgctggagcgccattacgaaaccatcctcaccgaagcgcaactg
gacgcctggctggcaaggctgatggcggccaaggtagtgtcgttcgacaccgaaaccacc
agcctcgatccgatgcaggcgcgcatcgtcggcgtcagcttctcggtggaggccggccat
gccgcctacctgccgctggagcaccattacgccggcgcgccgcagcaactgccgctggag
gcggctctggccaagctcaagccgtggctggaggacgcaagcaagaagaagtgcgggcag
aacctgaaatacgactgccacgtgctggccaaccacggcatcgccctcgccggcatcgca
gacgattcgatgctggcctcctacgtgctggaaagccaccagcgccacaatatggacgac
ctggcgcgccgccatctgggcgagaacaccgtcagttatgaagagatttgcggcaagggc
gccaagcagatcggcttcagcgaggtcgacgtcgacatcgccgccaattacgcggccgag
gacgccgacatcacgctgcgcttgaaccagttcttcgccgggcagctcttcggcgatctg
gaaaaagtttaccgcgacatcgagctgccggtggccgaggtgctgttcaagatggaacgc
cacggcgtgctgatagatcgcgacaaactggccgcgcagagccaccagctgggcagtcag
atgctggagctggaacagcgggcctacgagctggccggccagccgttcaacctgaattcg
ccgaagcagctgcaggaaatcctgttcggcaagctggcgatcccgaccaagggcgtcaag
aaaacgccgtcgggcggttactccaccgatgagtcggtgctggagcaactggcgctggat
catccgctgccgaagtgcatcctggaataccgcgggctggccaaattgaagtcgacttac
accgacaagctgccgacgctgatttatccacagaccggccgcgtgcacacgacttatgca
caggcagtggcgatcaccggacggctggccagcaacgatccgaacctgcagaacattccg
gtgcgcaccgccgagggccgccgcgtgcgcgaggccttcatcgcgccggccggctggcag
atcgtttcggccgactattcgcagatcgaactgcgcatcatggcccacctgtccgacgac
gaaggcatgctgaaggccttcgccagcggcgaggacatccaccgcgccaccgcggccgag
gtgttcggcgtggagctggcggcggtgacgtccgaccaacgccgcgccgccaaggcgatc
aacttcggcctgatctacggcatgagcgcgtttggactcgccgcccagctcgacatcgag
cgcagcgccgcccagcaatacatcgaccgctacttcatgcgctacccgggcgtggccgaa
tacatgcaggccacgcgcgagaaggcgcgcgagcagggctatgtggagacggtgttcggc
cgccggctgtacctgccggacatcaagctcagcaacccgggccggcgcgccggcgccgag
cgcgcggcgatcaacgcgccgatgcagggcaccgccgccgacctgatcaagctggcgatg
atagccgtgcaggactggctggagcgcgacggcttgcagagcaagctgatcatgcaggtg
cacgacgaactggtgctggaagtgccgcaggccgagctggagcaggtcaagcgccggctg
ccggaaatcatggccggcgcggccgagctcaaagtgccgctgctggccgaggtcggggcc
ggcgacagctgggaagccgcgcactga
DBGET
integrated database retrieval system
