Chromobacterium violaceum: CV_0877
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Entry
CV_0877 CDS
T00147
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CV_0877 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_0877 (xthA)
Enzymes [BR:
cvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CV_0877 (xthA)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CV_0877 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AAQ58551
LNCC_Brazil:
CV0877
UniProt:
Q7NZP5
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All DBs
Position
905676..906449
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AA seq
257 aa
AA seq
DB search
MRFATWNVNSLKVRLPQVLQWLAETGVEVLCLQELKMDQGAFPLAEIEAAGYRAVWFGQK
TYNGVAILARTPLEMTDVVAGIPGYGDEQRRVIAATVNGVRVICGYFVNGEAVDSPKYPY
KLEWLSKLEGYVAAELARHPQLLLLGDYNIAPEDRDVYDPEGWREQVLCSTPERDAFRRL
IALGLSDSFRLFNQEEKQYSWWDYRQMMFRRNKGVRIDHILVSDALKPRAQACEIDKAPR
KWERPSDHTPVVLTLAD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgccacctggaacgtcaattccctgaaagtccgcctgccgcaggtgctgcag
tggctggccgaaaccggcgtcgaagtgctgtgcctgcaggaactgaagatggaccagggc
gctttcccgctggcggagatcgaggcggccggctaccgcgcggtctggttcggccagaag
acctacaacggcgtcgccatcctggcgcgcacgccgctggaaatgaccgacgtggtcgcc
ggcatccccggctacggcgacgagcagcgccgcgtgatcgccgccaccgtgaacggcgtg
cgggtgatctgcggctatttcgtcaacggcgaggcggtggattcgcccaagtacccgtac
aagctggaatggctgtccaagctggagggctacgtcgccgccgagctggccaggcatccg
cagctgctgctgctgggcgactacaacatcgcgccggaagaccgcgacgtctacgatccg
gagggctggcgcgagcaggtgctgtgcagcacgccggagcgcgacgccttccgccgcctg
atcgcgctgggcctgtccgacagcttccgcctgttcaaccaggaggaaaagcagtacagc
tggtgggactaccgccagatgatgttccgccgcaacaagggcgtgcgcatcgaccacatc
ctggtcagcgacgcgctcaaaccccgcgcgcaggcctgcgagatcgacaaggcgccgcgc
aagtgggagcgcccgtccgaccacactccggtggtgctgaccctggccgattga
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