Chromobacterium violaceum: CV_0911
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Entry
CV_0911 CDS
T00147
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03030
DNA replication
cvi03430
Mismatch repair
cvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CV_0911 (dnaE)
03430 Mismatch repair
CV_0911 (dnaE)
03440 Homologous recombination
CV_0911 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvi03032
]
CV_0911 (dnaE)
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_0911 (dnaE)
Enzymes [BR:
cvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CV_0911 (dnaE)
DNA replication proteins [BR:
cvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CV_0911 (dnaE)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CV_0911 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AAQ58585
LNCC_Brazil:
CV0911
UniProt:
Q7NZL1
LinkDB
All DBs
Position
complement(940091..943525)
Genome browser
AA seq
1144 aa
AA seq
DB search
MNAPRFVHLRLHSEFSITDGIVRLDDAVKRAAKEQMPALGVSDLMNLFGMVKFYKSCRNK
GIKPIVSADIWLENEEDRDKPYRLMLTAKNREGYRRLCELLTEAFSHNQYRGRAEIKRAW
LASGDNSNLLCLSGAHLGDVGIALSMGQRDEARRRAEYWESLFPGAFYLEIQRVDSAQVE
NVVQATLWLAGETGLPVVATHPIQFMEKEDFKAHEARVCIAEGYTLGDKRRPRSFSECQY
FLSAEQMVERFADIPEALANTVEIAKRCNISVVLGKNYLPLFPTPDGMSLDDFLVHEAKR
GLEERLKQLYPDEAERQEKRPDYDARLKFECDTIIQMGFPGYFLIVADFIQWGKANGCPV
GPGRGSGAGSLVAYSLSITDLDPLKYALLFERFLNPERVSMPDFDVDFCQENRWRVIEYT
RRKYGEEAVSQIATFGTMSSKSVIRDVGRVLDLPFGLCDRLSKLIPLEANKPLSLEKAMQ
VEPQIGEIIESEGAQELIELAMTLEDLTRGIGMHAGGVLIAPGRLTDFCPLYIASGDGAS
PVSQFDKDDVEQIGLVKFDFLGLRNLTIIELAQKYIKDLTGEDVDVAHLPLDDKPAYKVF
ATANTTAVFQFESTGMKKMLVEAKPSKFEEIIAFVALYRPGPMDLIPDFIQRMHGAKFEY
LHPLLEPVLAPTYGIMVYQEQVMQSAQVIGGYSLGGADLLRRAMGKKKVEEMVAQRAMFV
QGAAKQDIPEAKANEIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHHCAAYMAATMS
TELDNTDQLKVFYDDCQDPKNGVTFLPPDVNHGFYRFVPVSRKEIRYALGAIKGTGESAV
NHIVEVREAGGPFTDLFDFCKRTDKKLVNKRVIEALIRAGAFDAIEPNRALLFANVGLAM
EAAEQAHANANQGGLFDMFGDDVAPAVEMAATRPWSDAVKLAEEKLAIGFYLSDHPFSAY
EKEVRGFIKTTLSRLTPRKEPQLLAGFVTGIRVKVGNRGKMAFVQLDDGTAKLEVSLFAE
SFELNRDKLKEDVVLVVEGKVSEDSFSGGLRIVVDKLYSLGEARSRYARGLALQLPAKPD
IARLKSELHPFKSQDAGCLVRLAYNNGKAKGELMLPQEWGVRLDDGLLLSLADWLGEGKV
KVLW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccccgctttgtccatcttcgcctccactcggagttttccatcaccgacggc
atcgtccgcctcgacgacgcggtcaaacgcgccgccaaggaacagatgcccgcgctcggc
gtgtccgacctgatgaatctgttcggcatggtcaagttctacaagagctgccgcaataag
ggcatcaagcccatcgtctccgccgacatctggctggaaaacgaagaagaccgcgacaag
ccttaccggctgatgctgacggcgaagaaccgcgagggctaccgccggctgtgcgagctg
ctgaccgaggcgttcagccacaaccagtaccgcggccgcgccgagatcaagcgcgcctgg
ctggcatccggcgacaacagcaacctgctgtgcctgtccggcgcccacctgggcgacgtc
ggcatcgcgctgtccatgggccagcgcgacgaagcgcgccgccgcgccgagtattgggaa
agcctgttcccgggcgcgttctacctggaaatccagcgcgtggacagcgcccaggtggaa
aacgtggtgcaggcgacgctatggctggccggcgagaccgggctgccggtggtcgccacc
catcccatccagttcatggagaaggaagacttcaaggcccacgaggcgcgggtgtgcatc
gccgaaggctacacgctgggcgacaagcgccggccgcgcagcttcagcgagtgccagtat
ttcctcagcgccgagcagatggtcgagcgcttcgccgacatccccgaggcgctggcgaat
accgtggaaatcgccaagcgctgcaatatctcggtggtgctgggcaaaaactatctgccg
ctgttcccgacgcctgacggcatgtcgctggacgacttcctggtccacgaggccaagcgc
ggcctggaggagcggctgaagcagctgtacccggacgaggccgagcgccaggaaaagcgg
cccgactacgacgcgcggctgaaattcgagtgcgacaccatcatccagatgggcttcccc
ggctacttcctgatcgtggccgacttcatccagtggggcaaggccaacggctgcccggta
ggtcccggccgcggctccggcgccggctccctggtggcctacagcctgtcgattaccgat
ctggacccgctgaagtacgcgctgctgttcgagcgcttcctgaacccggagcgggtgtcc
atgcccgacttcgacgtggacttctgccaggaaaaccgctggcgggtgatcgaatacacc
cgccgcaaatacggcgaggaggcggtgagccagatcgccaccttcggcaccatgtcgtcc
aagtcggtgatccgcgacgtcggccgcgtgctggacctgcccttcggcctgtgcgaccgc
ctgtccaagctgatcccgctggaggccaacaagccgctgagcctggaaaaggcgatgcaa
gtggagccgcagatcggagagatcatcgaaagcgagggcgcgcaggagctgatcgaactg
gcgatgacgctggaagacctgacccgcggcatcggcatgcacgccggcggcgtgctgatc
gcgcccggcaggctgaccgatttctgcccgctgtacatcgccagcggcgacggcgcctct
cccgtctcgcagttcgacaaggacgacgtcgagcagatcggcctggtgaagttcgacttc
ctgggcctgcgcaacctgaccatcatcgagctggcgcagaagtacatcaaggatctcacc
ggcgaggacgtcgacgtcgcccacctgccgctggacgacaagccggcctacaaggtgttc
gccaccgccaacaccaccgccgtgttccagttcgagtccaccggcatgaaaaagatgctg
gtggaagccaagccgagcaagttcgaggaaattatcgccttcgtggccttgtatcgcccg
ggcccgatggacctgatccccgacttcatccagcgcatgcacggcgccaagttcgagtac
ctgcacccgctgctggagccggtgctggcgccgacctacggcatcatggtgtaccaagag
caggtgatgcagtcggcgcaggtgatcggcggttactcgctgggcggcgccgacctgctg
cgccgcgcgatgggcaagaagaaggtcgaggaaatggtggctcagcgcgcgatgttcgtg
cagggcgccgccaagcaggacattcccgaagccaaggccaacgaaatcttcgactacatg
gagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcgctggtggcc
taccacaccgcctggctgaaggcccaccactgcgcggcctatatggcggcgacgatgtcc
accgaattggacaacaccgaccagctgaaggtgttctacgacgactgccaggaccccaag
aacggcgtcaccttcctgccgccggacgtcaaccatggcttctaccgcttcgtgccggtc
agccgcaaggaaatccgctacgcgctgggcgcgatcaagggcaccggcgaatcggcggtc
aatcacatcgtcgaggtgcgcgaggccggcggcccgttcaccgacctgttcgacttctgc
aagcgcaccgacaagaagctggtcaacaagcgggtgatcgaggcgctgatccgcgccggc
gccttcgacgccatcgaacccaaccgcgcgctgttgttcgccaatgtcggcctggcgatg
gaggccgccgagcaggcgcacgccaacgccaaccagggcggcttgttcgacatgttcggc
gacgacgtcgcgccggcggtggaaatggcggccacccgtccctggagcgacgcggtcaag
ctggccgaggaaaagctggcgatcggcttctacttgtccgaccacccgttctcggcctac
gagaaggaagtacgcggcttcatcaaaaccacgctgtcgcggctgacgccgcgcaaggag
ccgcagctcttggccggcttcgtcaccggcatccgcgtcaaggtgggcaaccgcggcaag
atggctttcgtgcagctggacgacggcaccgccaagctggaagtcagcctgttcgccgag
agcttcgagctgaaccgcgacaagctgaaggaggacgtggtgctggtggtggagggcaag
gtcagcgaggacagcttctccggcggcctgcgcatcgtcgtcgacaagctgtacagcctg
ggcgaggcgcgcagccgctacgcccgcggcctggcgctgcaactgccggccaagcccgac
atcgcccgcctcaagtccgagctgcatccgttcaagagccaggacgccggctgcctggtg
cggctggcctacaacaacggcaaggccaagggcgaactgatgctgccgcaggaatggggc
gtgcgcctggatgacggcctgctgctgtccctggcggactggctgggcgaaggcaaggtc
aaggtgctgtggtga
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integrated database retrieval system
