Chromobacterium violaceum: CV_1020
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Entry
CV_1020 CDS
T00147
Name
(GenBank) probable DNA-directed DNA polymerase III (epsilon subunit)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03030
DNA replication
cvi03430
Mismatch repair
cvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CV_1020
03430 Mismatch repair
CV_1020
03440 Homologous recombination
CV_1020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvi03032
]
CV_1020
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_1020
Enzymes [BR:
cvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CV_1020
DNA replication proteins [BR:
cvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CV_1020
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CV_1020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DUF7508
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AAQ58694
LNCC_Brazil:
CV1020
UniProt:
Q7NZA2
LinkDB
All DBs
Position
1062256..1063701
Genome browser
AA seq
481 aa
AA seq
DB search
MFAQPCAIIDLETTGGNIARDRITEVGMVLIDGERVERLSWLVNPGQPIPPFIENMTGIS
NEMVAGAPPFSAQADELLDRLQGRLLLAHNARFDYGFLKNEFRRHGLRFQARALCTVKLS
RRLYPQHFKHSLDSLIARHGIDMPERHRALADAEAVYRFIRIAEAELGEDRVAHEAAQLL
SQPAELSSLPAELQQQIEDMPDSAGVYALFGADGRALYVGRAPNLYRKALGHFAERKPGH
KSHEVRIDEPVARVEWRECLGEFGARLQELQWLGRLQPLHNPRARMMGEICTLQVQAGDD
GYVRPLPVSARDIDFSRTADLYGLFRHAREARKALAQIALAQGLCQSVLGVEQVTSRKGA
PCAAYRIRRCRGACVGDEGADSHNARLLAALQRLKVKPWPFDGEVAVVERDEVCGDVTEH
LFDRWCYLGSRRNGGELEGTPAFDLDYYKLLEGWLRRPEPGGELRAPAEPAPAAARAAGR
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgcgcagccttgcgccatcatcgatctggaaaccaccggcggcaacatcgcgcgc
gaccgcatcaccgaagtcggcatggtgctgatagacggcgagcgggtcgagcgcctgtca
tggctggtcaaccccggccagcccattccgcccttcatcgagaacatgaccggcatcagc
aacgagatggtggccggcgcgccgccgttttccgcgcaggccgacgaattgctggaccgt
ttgcaggggcgcttgctgctggcgcacaacgcccgcttcgattacggcttcctgaagaac
gaattccgccgccacggcctgcgcttccaggcgcgtgcgctgtgcacggtcaagctgtcg
cgccggctgtacccgcagcatttcaagcacagcctggacagcctgatcgcccgccacggc
atcgacatgccggagcgccaccgcgcgctggcggacgcggaggcggtttaccgcttcatc
cggatcgccgaggccgagctgggcgaagaccgggtggcgcatgaggcggcgcaattgttg
tcgcagccggcagagctatccagcctgccggccgaactgcagcagcagatcgaggacatg
ccggactcggccggcgtctacgcgctgttcggggcggacggccgcgcgctctacgtcggc
cgcgcgcccaatctgtaccgcaaggcgctgggccatttcgccgagcgcaagcccgggcac
aagagccacgaggtccggatagacgaaccggtggcgcgcgtggaatggcgggagtgcctg
ggcgagttcggcgcccggctgcaggagctgcagtggctgggcaggctgcagccgctgcac
aatccccgcgccaggatgatgggcgagatctgcacgctgcaggtgcaggccggcgacgac
ggctacgttcggccgctgccggtctcggcgcgcgacatcgacttcagccgcaccgccgat
ctatatggtctgttccgacacgcgcgcgaggcgcgcaaggcgctggcgcagatcgcgctg
gcccagggcctgtgccagtcggtgctgggcgtggagcaggtgaccagccgcaagggcgcg
ccctgcgcggcctaccggatccgccgctgccgcggcgcctgcgtcggcgacgagggcgcc
gacagccataacgccaggctgctggccgcgctgcagcggctcaaggtcaagccctggccg
ttcgacggcgaggtggcggtggtggagcgcgacgaggtatgcggcgacgtgaccgagcac
ctgttcgaccgctggtgctatctgggcagccgtcgcaacggcggcgagctggaggggacg
ccggctttcgacctcgattactacaagctgctggaaggctggctgcgccggccggagccg
ggcggcgagctcagggcgccggctgagccggcgccagcggccgcgcgcgcagcaggccgt
atttga
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