KEGG   Chromobacterium violaceum: CV_1329
Entry
CV_1329           CDS       T00147                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
cvi  Chromobacterium violaceum
Pathway
cvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CV_1329 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvi03400]
    CV_1329 (sbcB)
Enzymes [BR:cvi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     CV_1329 (sbcB)
DNA repair and recombination proteins [BR:cvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CV_1329 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CV_1329 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CV_1329 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T TMP_4
Other DBs
NCBI-ProteinID: AAQ59004
LNCC_Brazil: CV1329
UniProt: Q7NYE5
LinkDB
Position
complement(1398832..1400250)
AA seq 472 aa
MSNHTFFWHDYETFGAVPRQDRPSQFAGIRTDAELNEIGEPVMLYCRPAPDYLPTLQACL
LTGITPQLCRQQGVAEHEFAGVIERELATPATIGVGYNSLRFDDEVTRFLFWRNLIDPYA
REWQNHCGRWDLLDLVRATYALRPDGIVWPKHEDGRTSFKLEHLSAANGLAHASAHDALS
DVRATIALARLIRQRQPKLFDYYLTLRKKDAVKVQLSLHDPKPVLHVSGMYGVERGNLAV
VWPLAAHPTNANEVIVWDLAHDPAELRGLSADDIRQRMFTRADELPEGVARLPVKTIHIN
KSPFVVANLKALGDDNAARWGMDLAAIHRHAEAARALPDLSALWRRVYQREAGEPQDVDQ
NLYGGFVSNNDRKALQKMRRLSAAQLAGEMALFEDPQLAELLFRYRARNFPDTLSGDEQK
RWKAWCQARLAQSWPAFQQELAELRAGELTDGQRNLLQQVADYAASLQASLA
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgtccaatcacacgttcttctggcacgactacgaaaccttcggcgccgtgccgcgccag
gaccgcccgtcgcagttcgccggcatccgcaccgacgccgagctgaacgagatcggcgag
ccggtgatgctgtactgccgccccgcgcccgattacctgcccacgctgcaggcctgcctg
ctgaccggcatcacgccgcagctgtgccggcagcagggcgtggcggaacacgagttcgcc
ggcgtgatcgagcgcgagctggccacgcccgccaccataggcgtcggctacaactcgctg
cgcttcgacgacgaggtcacccgcttcctgttctggcgcaacctgatcgacccctacgcc
cgcgaatggcagaaccactgcggccgctgggacctgctggacctggtccgcgccacctac
gcgctgcgccccgacggcatcgtctggcccaagcacgaggacggccggaccagcttcaag
ctggagcacctgtccgccgccaacgggctggcgcatgcgtcggcccacgacgcgttgtcc
gacgtgcgcgccaccatcgcgctggcgcggctgatccgccagcgccagcccaagctgttc
gactactacctgacgctgcgcaagaaggacgcggtcaaggtgcagctgtcgctgcacgac
cccaagccggtgctgcacgtctccggcatgtacggcgtggagcgcggcaatctggccgtg
gtctggccgctggccgcccacccgaccaatgccaacgaggtcatcgtctgggacctggcc
cacgacccggccgaactgcgcggcctctccgccgacgacatccgccagcgcatgttcacg
cgcgccgacgaactgcccgaaggcgtggcgcggctgccggtcaagaccatccacatcaac
aagtcgccgttcgtggtggccaatctgaaggcgctgggcgacgacaacgccgcgcgctgg
ggcatggacctggccgccatccaccgccacgccgaggccgcccgcgcgctgccagacctg
tcggcgctgtggcgccgcgtttatcaacgcgaagccggcgagccgcaagatgtggatcaa
aacctctacggcggcttcgtctccaacaacgaccgcaaggcgctgcagaaaatgcgccgg
ctgtccgccgcccagttggccggcgagatggcgctgttcgaggacccgcagctggccgag
ctgctgttccgctaccgcgcccgcaacttcccggacaccttgtccggcgacgagcaaaag
cgctggaaagcctggtgccaggccaggctggcccaatcctggccggcgttccagcaggag
ctggccgaactgcgggccggcgaactgaccgatggccagcgcaacctgctgcaacaagtg
gccgactacgccgccagtcttcaggccagtctggcctga

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