Chromobacterium violaceum: CV_1621
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Entry
CV_1621 CDS
T00147
Name
(GenBank) probable sensor/response regulatory hybrid protein
Organism
cvi
Chromobacterium violaceum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
CHASE
PAS_9
PAS
Response_reg
PAS_3
HATPase_c
HisKA
PAS_8
Hpt
PAS_11
Diguanyl_cycl_sensor
MEKHLA
Motif
Other DBs
NCBI-ProteinID:
AAQ59297
LNCC_Brazil:
CV1621
UniProt:
Q7NXK5
LinkDB
All DBs
Position
1751569..1756815
Genome browser
AA seq
1748 aa
AA seq
DB search
MSEHCDSSAWMKKPLLPASATALLVLLLGAVLSLSLGWKVSRDNRERVDAELRREARQLG
VEVAARIRRYQNGLGGARGAIASNGEHGINRQRFRVYTQSLNAAVEFPGLLGFGYARRVP
PQRVAEFVRQERRDGEPGFSIRQLRPHEGERAVIVYFEPEPGNRFVIGVDIASEPSRRAA
AEAALRSGQARLSEPIALMPHPEDKAQAFLLLLPVYAGGATPASEEGRLRAGFGWVFAPI
RAQDAMAGLMADLPGVAVELADVTDGRKAVFFQGGSNPAQPIAAASELQPLFGRDWRLSL
RAGPAFADSLKLPSAALVASSGLAASVLSALLALVVGRNRQRRRELLAAQSRLAAIVEGS
VDAIISKTLDGVVTSWNLSAERLFGYRADEAVGQPLAKLIVPEDRRGEEVDILRRIARGE
RIEHFETVRMRKDGSLLIVSVSISPVLDEAGRVVGASKVLRDLSEQKRIKAELQVLSENL
EQRVADRTAELDQAWRTLQTVLDAVPFIIGYWDCDQINRVANHAYRTWFGIDPGALPGMR
MRDLLGEPLYQANLPHIEAVLGGEPQVFERQICGQDGVVRHSLTTYLPDLVNDEVRGFYA
IVQDISEQVESRSRLTSALKERELLLDTINQQLLYTATDTDGRILEANDLFCQVHGYERK
ELLGWDHRKLSAGVHPAMFWQSLWRTIASGRVWRGEVCNQTREGRQRWFDTVIVPHAGDS
GRIERYIALRIDITERKLADAELARVHGMLSNVLRAASEVAIIAADVHGVVSLFNSGAQR
MLGYSENEMVGRAMLTHFHLPEELREHGEALSQRYERQVEGLRALVQEPEASGAETREWT
YVRKDGSQLQVSLMVTAMRDADELVVGYLAIAADITIPQRQQRELVAARDQLQLAAEVAQ
LGVWSWSPADNQLRWNAQMFEIYRQPPELAERGLEYRHWRERVHPDDVDSVEADLRALLE
RGEAMDRVFRVRLPDGEMRYVQVGARLERHGDGVRVTGINRDITETRAYEQNLLEAKRQA
EEASMVKSQFLANMSHEIRTPMNAVLGLLQLMQHTRLDERQLDYVGKIQAAAKSLLGLLN
DILDFSKIDAGKLQLDLHPFDLEGLMRELAVVLSGNTNDKDVEVLFRMEPTLPAMLIGDK
LRLQQILINLAGNALKFTTQGQVVLAVRERARREGEVELRIEVSDTGIGIAPEQLSRIFE
GFTQAEASTTRRFGGTGLGLVISRRLVELMGGQLRVESQLGCGSRFWFDLTLGMAADQPL
AQLPEPLGQLNVLVVDDNPLAGEILMDTISTVGWRAEYADGGEEALEKVHGAGSAGQRYD
VVLMDWRMPGLDGVGVAEVMRQQLAGDKPPVIIMVTAFGREVLAEAAERPNPPFNDFLTK
PITPQQLVDAVVRSVTGEGEAERTPATTAFGRRLDGMSVLLVEDNALNRQVASELLQEEG
ARVSLAEGGLSGVSQAVSADPAFDIVIMDVQMPDIDGLEATRRIRADMRCQRLPILAMTA
NASQADRAACLAAGMNDHVGKPIDIDELVPKLLALAGREGGPDGTAASVPAPRADDSGAL
VESLPSRLRRFGNKLRVYRAALATFRPECETLLSGIAESGRLDARPELASGLHTLKGLAA
TLGAQALSRLAAELEKRARDGEAISGEDLERLRGLLGDSVAQLFDSLPAEETGKTAKPLP
DGDWRRQLRDILALLEDSNLAAIDLVDELLDRPLGAQEDSVREVAACVQRLQFEQAIAIV
RELLALAD
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaacattgcgattcgtccgcctggatgaaaaaaccgctattgcccgcgtcggcc
accgcgctgctggttctgctgctgggcgccgtcctgagcctgtcgctgggctggaaagtc
tctcgcgacaaccgcgaacgcgtcgatgccgagctgcggcgcgaggcgcggcaactgggc
gtggaggtggccgcccgcatccggcgctaccaaaatggcttgggcggcgcgcggggcgcg
atcgccagcaacggcgagcacggcatcaaccgccagcgtttccgggtctatacccagagc
ttgaacgctgcggtcgaattccccggcttgcttggattcggctatgcgcgcagggtgccg
ccgcagcgggtggcggaattcgtgcgacaggagcgccgggatggcgagcctggcttctcc
attcgccagctgcgtccgcatgagggcgagcgcgcggtcatcgtctatttcgagccggaa
ccgggcaatcgtttcgtcatcggagtcgatatcgcgtccgagcccagcaggcgggcggcg
gcagaggccgcgctgcgcagcgggcaagcccggctgagcgaacccatcgccctgatgccg
catccggaagacaaggcgcaagcctttctgctgttgttgccggtgtacgccggcggcgcg
acgccggccagcgaggagggcaggctgcgggcgggcttcggctgggttttcgcgcccatc
cgggcgcaggatgcgatggcggggctgatggccgacctcccgggcgtcgccgtggaattg
gccgacgtgacggacggcaggaaggcggttttctttcagggcgggtcgaatccggcccag
cccatcgccgcggcctcggagctgcagccgctgttcggccgggactggaggctgtccttg
cgcgccggaccggccttcgccgacagcctgaagctgccaagcgccgcgctggtggcgtcg
tcaggcttggcggcgagcgtcctgtccgctctgctggcgctggtggtggggcgcaatcgc
cagcggcggcgagagctgctggcggcgcagagccggctggcggccatcgtcgagggctcg
gtggacgccatcatcagcaagaccctggacggcgtggtcaccagctggaatctcagcgcg
gagcggctgttcggctatcgggccgacgaggctgtggggcagccgctggcgaagctgatc
gtgccggaggacaggcgcggagaggaggtggacatcctgcgccggatcgcccgcggcgag
cgcatagagcacttcgaaacggtacgcatgcgcaaggacgggagcttgctgatcgtgtcg
gtatcgatctcgccggtgctggacgaggccgggcgggtggtgggcgcgtccaaggtgctg
agggacctcagcgagcagaagcggatcaaggccgaactgcaggtgctgagcgaaaatctc
gagcaaagggtggccgaccgcacggcggaactggatcaggcctggcgcacgctgcagacg
gtgctggacgccgtgccgttcatcatcggctattgggattgcgaccagatcaatcgcgtg
gccaatcacgcgtaccgtacctggttcggcatcgatccaggggccttgccgggcatgcgg
atgcgcgatttgctgggagagccgctctaccaggccaacctgccgcatatcgaggcggtg
cttggcggcgaacctcaggttttcgagcggcagatttgcggacaggacggcgtggtgcgc
cattcgctgacgacgtatctgcccgacctcgtcaacgacgaggtccggggcttctacgcc
atcgtccaggacatttccgagcaagtggagagccgcagccggctgacttcggcgctgaag
gagcgcgagttgctgctggacactatcaaccagcagctgctgtacaccgccaccgatacc
gacggacggatactggaggccaacgatctgttctgccaggttcacggctacgagcgcaag
gaattgctgggctgggatcaccgcaaattgagcgctggcgtccatccggcgatgttctgg
cagtcgctgtggcgcaccatagcctcgggccgcgtgtggcgcggcgaggtctgcaaccag
acccgggagggcaggcagcgttggttcgacaccgtgatcgtgccccatgccggggacagc
ggccgcatcgagcgctatatcgcgctgcgcatcgacatcactgagcggaagttggccgac
gccgagctcgcccgcgtgcatggcatgttgagcaatgtgctgcgcgcggcgtcggaagtg
gccatcatcgccgccgacgtccatggcgtggtttcgctgttcaacagcggcgcgcagcgc
atgctcggctacagcgagaacgagatggtggggcgggcgatgctgacccatttccatctg
ccggaggagttgcgcgagcatggcgaggccttgagccagcgttatgagcgccaggtggag
gggttgcgcgcgctggtgcaggagcccgaggccagcggagccgagacgcgggaatggacc
tatgtccgcaaggacggctcccagcttcaggtatcgctgatggtgaccgcgatgcgggac
gccgacgagctggtggtcggctacctggccatcgccgccgacatcaccattccgcagcgg
cagcagcgggagctggtggcggcccgcgaccagttgcagctggctgccgaagtggcccag
cttggagtgtggagctggtcgccggcggacaaccagctgcgctggaacgcgcagatgttc
gaaatctaccgccagccgccggaactggcagagcgggggctggagtaccggcactggcgc
gagcgggtgcatccggacgatgtggacagcgtggaggccgacctgcgcgcgctgctggag
cgcggcgaggcgatggacagggtgttccgggtgcggctgccggacggagagatgcgctac
gtgcaggtcggcgcgcgtctggagcgccacggcgacggcgtgcgggtgacgggcatcaac
cgcgacatcaccgaaacccgcgcctacgagcagaatctgctggaagcgaagcgccaggcc
gaagaagccagcatggtgaagagccagttcctggccaatatgagccacgagatccgcacg
ccgatgaacgcggtgctggggctgctgcaactgatgcagcatacccggctggacgagcgc
cagctcgattacgtgggcaagatccaggcggcggccaagtcgctgctgggcctgctcaac
gacatcctagacttttccaagatcgacgccggcaagctgcagctggacctgcaccctttc
gatctggagggcctgatgcgggagttggcggtggtgttgtccggcaataccaacgacaag
gacgtcgaggtgctgttccgcatggagccgacgctgcccgccatgctgatcggggacaag
ctgaggctgcagcagatcctgatcaacctggccggcaacgcgctcaaattcaccacgcaa
ggccaggtcgtcctcgctgtccgggaacgggcgcgccgcgaaggcgaggtcgagttgcgc
atcgaggtcagcgacaccggcatcggcatcgcgccggagcagctgtcgcgcattttcgaa
ggcttcacccaggccgaggcctccaccacccggcgcttcggcggcaccggcctgggcctg
gtgatcagcaggcggctggtggagctgatgggagggcagctcagggtggagagccagctc
ggctgcggcagccgtttctggttcgacctgaccctgggcatggcggcggatcagccgctg
gcgcaactgcccgagccgctgggacaactgaacgtcctggtggtggatgacaatccgctg
gcgggcgagatactgatggataccatctcgaccgtcggctggcgcgccgaatatgccgat
gggggcgaggaggcgctggagaaagtgcacggggcgggttccgccggccagcgttacgac
gtggtgctgatggactggcgcatgcccggcctggacggcgtgggcgtcgccgaagtgatg
cggcagcaactggcgggcgacaagccgccggtgatcatcatggtgacggctttcggccgc
gaggtgctggccgaggcggccgagcggccgaacccgccgttcaacgatttcctgaccaag
ccgattaccccgcagcaactggtggacgccgtggtccgctcggtgacgggagagggcgag
gcggaaaggacgcctgcgactacggcgttcggccgtcgcctggacggcatgagcgtcctg
ctggtggaggacaacgccctcaatcgccaggtggcgtccgagttgctgcaggaggagggc
gcgagagtcagcctggccgaggggggactgtcgggggtgtcccaggcggtgtcggccgac
ccggcgttcgacatcgtgatcatggacgtgcagatgccggacatcgatggattggaagcc
acccgccgcatccgcgccgacatgcgctgccagcggctgccgattctggcgatgacggcc
aatgcgtcccaggccgatcgcgcggcctgcctggcggcgggaatgaacgaccacgtcggc
aagccgatagacatcgacgaactggtgcccaagctgctggcgttggcggggcgcgaaggc
ggtccggacgggacggcggcgagcgttccggcgccgagggccgacgattccggcgcgctg
gtcgaatcgctgccttcgcggttgcgccgtttcggcaacaagctgcgggtctatcgcgcc
gcgttggccaccttccgtccggaatgcgagacgctgctgtccggcatcgcagagagcggc
cgcctggatgcgcggccggagctggcgtcgggcttgcataccctgaaggggctggcggcg
acgctgggcgcgcaggcgctgagccggctggccgccgagctcgaaaagcgcgcgcgggac
ggggaggcgataagcggcgaggatctcgagcgtttgcgcgggctgctgggcgacagcgtg
gcgcagctgttcgacagcctgccggcggaagagacgggcaagacggcgaaaccgcttccg
gacggggattggaggaggcagctgcgcgacatcctggccttgctggaggacagcaatctg
gcggcgatagacctggttgacgaattgctggaccggccgctgggcgctcaggaggactcg
gtgcgcgaagtggcggcctgcgtgcaacggctgcagttcgagcaggcgatcgccatcgtc
cgggagctgctggcattggcggactga
DBGET
integrated database retrieval system
