KEGG   Chromobacterium violaceum: CV_2475
Entry
CV_2475           CDS       T00147                                 
Symbol
recJ
Name
(GenBank) exodeoxyribonuclease VII
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cvi  Chromobacterium violaceum
Pathway
cvi03410  Base excision repair
cvi03430  Mismatch repair
cvi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CV_2475 (recJ)
   03430 Mismatch repair
    CV_2475 (recJ)
   03440 Homologous recombination
    CV_2475 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvi03400]
    CV_2475 (recJ)
DNA repair and recombination proteins [BR:cvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CV_2475 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CV_2475 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CV_2475 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Glyco_transf_4 Glyco_trans_4_4
Other DBs
NCBI-ProteinID: AAQ60146
LNCC_Brazil: CV2475
UniProt: Q7NV69
LinkDB
Position
complement(2662565..2664253)
AA seq 562 aa
MSQIVTREVPAELQQKLLGQGLTPLQARLYAARGIADSEELDYGLKGLLPYQKLKNVEAM
ASRLADAIAAKQRLLVVADYDADGATACAVAVKGLSMLGAIIGFIVPNRFEYGYGLTPEI
VELAAQKRPDIIVTVDNGIASVAGVEAAKARGIEVLVTDHHLPGDTLPEALIVNPNQPGC
EFPSKNLAGVGVMFYVLMALRVEMRRRGVFDEQTQPNLGVLLDLVALGTVADVVRLDRNN
RTLVENGLKRMRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGI
ACLLASNEEQAMRLAQELDKLNRERRGIEAGMQDEALAALSGIDAGNRYTLSLYRDDWHQ
GVVGIVASRLKERFHRPAIVFAPGDEGEIKGSGRSIPGFHLRDALDLVYKRHPGLILKFG
GHAMAAGLSLDESRFAEFQQAFEAVARELLDEKQLTRMIETDGSLPARDLSLQLAETLAA
EVWGQGFPVPYFHDQFMVVNQKLVGDKHLKLRLAREGCEFDAMLFNHADWLPDRIQAVYQ
LIANEWQGRKELQVYLQHWAAA
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgtcgcaaatcgttacccgcgaagtgcccgccgaactgcagcaaaagctgctcggccag
ggcctgaccccgctgcaggcgcggctgtacgccgcccgcggcatcgccgacagcgaagag
ctggactacggcctgaagggcctgctgccttatcaaaaactgaagaacgtcgaagcgatg
gccagccgcctggccgacgccatcgccgccaagcagcgcctgctggtggtcgccgattac
gacgccgacggcgccaccgcctgcgcggtggcggtgaagggcctgtccatgctgggcgcc
atcatcggcttcatcgtgcccaaccgcttcgagtacggttacggcctgacgccggaaatc
gtcgaactggcggcgcagaaacggccggacatcatcgtcaccgtcgacaacggcatcgcc
agcgtcgccggcgtggaagcggccaaggcgcgcggcatcgaggtgctggtcaccgaccac
cacttgccgggcgacaccttgccggaggcgctgatcgtcaaccccaaccagcccggctgc
gagtttccgtcgaaaaacctggccggcgtcggcgtgatgttctacgtgttgatggctttg
cgggtggagatgcgccggcgcggcgtgttcgacgagcagacccagcccaatctgggcgtg
ctgctggacctggtggcgctgggcacggtggcggacgtggtgcggctggaccgcaacaac
cgcacgctggtggaaaacggtctcaagcgcatgcgggccgggcggatggcgcccggcatc
gcggcattgttccgcgtcgccggccgcgcccactacaaggccaacaccttcgatctgggc
ttcaccctggggccgcggctgaatgccgccggccggctggacgacatgagcctgggcatc
gcctgcctgttggcgagcaatgaagagcaggcgatgcggctggcgcaggagctggacaag
ctcaaccgcgagcggcgcggcatcgaggccggcatgcaggacgaggcgctggcggcgctg
tccggcatcgacgccggcaaccgctacacgctcagcctgtaccgcgatgactggcaccag
ggcgtagtggggattgtggcttcccggttgaaggagcgcttccaccggccggccatcgtg
ttcgcgccgggcgacgagggcgagatcaagggttccggccgctcgattcccggcttccac
ctgcgcgacgcgctggacctggtctacaagcgccatccggggctgattctcaagttcggc
ggccacgcgatggcggccggcctgagcctggacgaaagccgcttcgccgagttccagcag
gcgttcgaggcggtggcgcgcgagctgctggacgagaagcagctgacccggatgatagaa
accgacggcagcctgccggcgcgcgacctcagcctgcaactggccgagacgctggcggct
gaggtgtgggggcaaggcttcccggtgccgtatttccacgaccagttcatggtggtgaat
cagaaactggtcggcgacaagcacctgaagctgcgcctggcgcgcgaaggctgcgaattc
gacgcgatgctgttcaaccatgccgactggctgccggaccgcatccaggcggtgtaccag
ctgatcgccaacgaatggcagggacgcaaggaactgcaggtctacctgcagcattgggcc
gcggcctga

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