Chromobacterium violaceum: CV_2872
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Entry
CV_2872 CDS
T00147
Name
(GenBank) probable hemagglutinin
KO
K15125
filamentous hemagglutinin
Organism
cvi
Chromobacterium violaceum
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvi00536
]
CV_2872
Glycosaminoglycan binding proteins [BR:
cvi00536
]
Heparan sulfate / Heparin
Microbial pathogens
CV_2872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg
TPS
YdbH-like
ESPR
Motif
Other DBs
NCBI-ProteinID:
AAQ60540
LNCC_Brazil:
CV2872
UniProt:
Q7NU31
LinkDB
All DBs
Position
complement(3139314..3146435)
Genome browser
AA seq
2373 aa
AA seq
DB search
MNKHLYRIIFNQSRGQLMVVQEDACGQGKGNGAEGVAATLAAACKAFSLRLSVLLIGLGL
GSSALAADIIADPNAAAGKQPGVIQSANGLPVVQIAAPTAAGVSHNQYQQFNVGPGGALL
NNSATLVNTQLAGYISGNPNLKNGSARIILNEVTQPNPSQLRGYLEVAGQRAQVVIANPW
GITCSGCGFINTQQATLTTGTPQLNAQGELTGYQVAGGRVSIDGAGLNAANVDSFAIISR
AVSINANLYAQKLDLVLGRNQVDTATLAAQPLAASPSDAPAFALDVAQLGGMYANAIKLV
GTEKGVGVNQLGTMAAQAGDLQLTSAGDLVLRGQTHSQQNLILQADGQLRHDGVTRAEGS
IQADIAGQTALHQALSAGGDLTLNTGSLQGDGALAAGALADGKLTEHGRLAVTSAGALQA
SGQLLAGGDVSLKAGQADLSQATVSASHGALDIRAAGDVNAQQARLSAAGAARLTIDGQL
DNRSGQLAATQVDLQLGALDNSQGKIVQSGQADSAWRINGSTDNRQGVLASAGHDLKLQS
GNLDNRGGEISHAGAGALRLSADALDNREQGRIASDGRLDAQAAQLDNRQGRLVGVLSAS
VDARQQLNNEGGVLGSDGAVKLGAGGLDNGAGLIQSGQDLQLTANSLTNADKGQILALGK
DAASKVDVSGELHNQGKVAGNADLTVNAASIDNSKGTLQAAAGLNLTKQTSLTNDGGHIA
SQSLKLNADSLSNQAGEIYAQQQLSSQLKTLDNAKGSVIGGQGVDLTVTDQLHNDGVVGS
DGQVKLTAGALENAAGTIQSGKDLQLTAASLTNADKGQILALGKDAASKVDVSGELHNQG
KLAGNADLTVNAATIDNAKGTLQAANHLELNKQSSLTNDDGHIAGQSLTLKADSLSNKSG
ELYAQGQLTSQLKTLDNSQGSLIGGQGVDLTVADSLHNDGVVGSDGQVKLNAGALENAAG
TIQSGKDLQLTASSLTNADKGQILALGKDAASTVDVSGELHNQGKVAGNADLTVNAASID
NSKGTLQAAAGLNLTKQSSLINDGGHITSQSLKLNADSLSNQAGEIYAQQQLTSQLKTLD
NAKGSVIGGQGVDLTVTDSLRNDGVVGSDGQVKLTAGALENAAGTIQSGKDLQLTAASLT
NANKGQILALGKDAASKVDVSGELHNQGKLAGNADLTVNAASIDNSKGTLQAASHLELSK
QSSLTNDGGHIAGQSLMLNADSLSNQAGEIYAQQQLSSTLKTLNNAQGSLIGGQGVDLTV
FDQLHNDGVLGSDGQVKLSAGTLENAAGTIQSGKDLQLTASSLSNADKGQILVLGKDAAS
KVDVSGELHNQGKLAGNADLTVNAASIDNSKGTLQAAAGLNLTKQSSLINDGGHITSQSL
KLNADSLSNQAGEIYAQQQLTSQLKTLDNAKGSVIGGQGVDLTVTDSLRNDGVVGSDGQV
KLTAGALENAAGTIQSGKDLQLTAASLTNANKGQILALGKDAASKVDVSGELHNQGKLAG
NADLTVNAASIDNSKGTLQAASHLELSKQSSLTNDGGHIAGQSLMLNADSLSNQAGEIYA
QQQLSSTLKTLNNAQGSLIGGQGVDLTVFDQLHNDGVLGSDGQVKLSAGTLENAAGTIQS
GKDLQLTASSLSNADKGQILVLGKDAASKVDVSGELHNQGKLAGNADLTVNAASIDNSKG
TLQAASHLELSKQTSLINDGGHIASQSLKLNADSLSNQTGEIYAQQQLSSQLKTLDNAKG
SVIGGQGVDLTVTDQLHNDGVVGSDGQVKLSVGTLENAAGTIQSGKDLQLSASSLTNADK
GQILALGKDAASKVGVSGELRNQGKLAGNADLTVNAASIDNSKGTLQAASHLELSKQSSL
INDGGHIAGQSLKLNADSLSNQAGEIYAQQQLSSTLKTLNNAQGSLIGGQGVDLTVADSL
HNDGVVGSDGQVKLNAGALENAAGTIQSGKDLQLTASSLTNADKGQILALGKDAASTVDV
SGELHNQGKVAGNADLTVNAASIDNSKGTLQAAAGLNLTKQSSLINDGGHITSQSLKLNA
DSLSNQAGEIYAQQQLSSQLKTLDNAKGSVIGGQGVDLTVTDQLHNDGVVGSDGQVKLTA
GALENAAGTIQSGKDLQLTAASLTNAEKGQILALGKDAASKVDVSGELHNQGKLAGNADL
TVNAATIDNAKGTLQAANHLELSKQSSLTNDDGHIAGQSLTLKADSLSNKSGELYAQGQL
TSQLKTLDNSQGSLIGGQGVDLTVADSLHNDGVVGSDGQVKLSAGTLDNAAGTIQSGKDL
QLTAASLTNADKGQILALGKDAASTVDVSGELHNQGKLAGNADLTVNAASIDNSKGTLQA
ASHLELSKQSSLINDGGHIAGQSLKLNADSLSN
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacacctttatcggatcatcttcaaccaatcccgcggccaactgatggtggtg
caggaggatgcctgcggacagggcaagggcaatggcgccgagggcgtcgccgctacgctg
gcggcggcgtgcaaggcattctcgctgcgcctgagcgtgctgctgatcggcctggggctg
ggcagcagcgccttggcggccgacatcatcgctgatcccaacgccgcggcaggcaagcaa
ccgggcgtgatccagtcggccaacggcttgccggtggtgcagatcgctgcgccgaccgcc
gccggcgtatcgcacaaccagtaccagcagttcaatgtcggccccggcggcgcgctgctc
aacaacagcgccactctggtcaatacccagctggccggctacatcagcggcaaccccaat
ctgaagaacggcagcgcccgcatcatcctcaacgaagtgacgcagcccaatccgtcgcag
ctgcgcggctatctggaagtggccggccagcgcgcgcaggtggtgatcgccaacccctgg
ggcatcacctgcagcggctgcggcttcatcaatactcagcaggccacgctgaccaccggc
acgccgcaactgaacgcccagggcgagctgaccggctaccaggtggccggcggccgcgtt
agcatagacggcgccggcctcaacgccgccaatgtcgacagcttcgccatcatcagccgg
gcggtgtcgatcaacgccaatctgtacgcgcagaagctggacctggtgctgggccgcaac
caggtggacaccgccacgctggcggcccagccgttggcggccagcccgagcgacgccccg
gctttcgcgctggacgtggcgcagctgggcggcatgtacgccaacgcgatcaagctggtg
ggcaccgagaagggggttggcgtcaaccagctgggcaccatggcggcccaggctggcgat
ctgcagctgaccagcgccggcgacctggtcctgcgcggccagacccacagtcagcagaac
ctgattctgcaggcggatggccaattgcgacatgacggcgtcacccgcgccgagggttcg
atccaggccgatatcgccggccagaccgccctgcaccaggcgctcagcgccggcggcgac
cttacgttgaacacaggctcgctgcagggggacggcgcgctggcggcgggggccctggcc
gatggcaagctgaccgagcacggccggctggcggtgaccagcgccggcgcactgcaagcc
agcggccaactgctggccggcggcgacgtcagtctgaaggctggccaggccgacctgtcc
caagccacggtcagcgccagccacggcgcgctggacatccgcgccgccggcgacgtgaac
gcgcagcaggcccggctgagcgctgccggcgccgcccgactcaccatcgatggccagctc
gacaaccgtagcggccagctcgcagccacccaggtcgacctgcaactgggcgcgctggac
aacagccagggcaagatcgtgcagagcgggcaagccgactcggcctggcgcatcaacggt
tccaccgataaccgccagggcgtgcttgccagcgccggccatgatctgaagctgcaaagc
ggcaatctggacaaccgcggcggcgagatcagccatgccggcgccggcgcgctgcgcctg
agcgcggacgcgctcgacaaccgcgaacagggccgcatcgccagcgacggccggctggac
gcgcaggcggcacaactggacaaccgccaggggcggctggtcggcgtcctgtcggcgtcc
gtcgacgcgcgccagcagctgaataacgaaggcggcgtgctgggcagcgacggcgcggtc
aagctgggtgccggagggctcgacaacggtgccggcttgatccagtccggtcaggacctg
cagctcacggctaatagcctcaccaacgccgacaaaggccaaatcctggccctcggcaaa
gacgcggcgagcaaggtggatgtcagcggcgagctgcacaaccagggcaaagtcgccggc
aacgccgatctgaccgtcaacgccgccagcatcgacaacagcaagggcacgctgcaggcg
gcggctggcttgaatctgaccaagcaaaccagcctcaccaacgacggcggccacattgca
agtcagagcctgaaactgaacgccgacagcctgagcaaccaggcgggcgagatctacgcc
cagcagcaactgagcagccaactgaagaccctcgacaatgccaagggcagcgtcatcggc
ggccaaggcgtcgacctgacggtgaccgaccagttgcataacgatggcgtggtcggcagc
gacggccaagtgaagctgaccgccggcgcgcttgagaacgccgccggcaccatccaatcc
ggcaaggacctgcaactgaccgccgcgtcgctgaccaacgccgacaagggccagatactg
gccctcggcaaagacgcggcgagcaaggtggatgtcagcggcgagctgcacaaccagggc
aagctggccggtaacgccgacctgaccgtcaacgcggcgacgattgataacgccaagggc
accttgcaggcagcgaaccatctggagttgaacaagcaaagcagcctgaccaacgatgac
ggccacatcgctggccagagtttgacgctgaaggccgattcgctcagcaataagagcggc
gaactgtacgctcagggccagctcaccagccaactgaagacgctcgacaacagccaaggc
agcctgatcggcggccaaggcgtcgacctgacggtggccgacagcctgcataacgacggc
gtggtcggcagcgatggccaagtcaaactcaatgccggcgcgctggagaatgccgctggc
acgattcaatcggggaaagatttacagctcacggcgtcaagtctgacgaatgctgacaaa
ggccagattctggcgctgggcaaggacgccgccagcactgttgacgtcagcggcgagctg
cacaaccagggcaaagtcgccggcaacgccgatctgaccgtcaacgccgccagcatcgac
aacagcaagggcacgctgcaggcggcggctggcttgaatctgaccaagcaaagcagcctg
atcaatgacggcggccatattaccagccagagcctgaaactgaacgccgactcgctcagc
aaccaggcgggcgagatctatgcccagcagcaactcaccagccagttgaagaccctcgac
aatgccaagggcagcgtcatcggcggccagggtgtcgacctgacggtgaccgacagcctg
cgcaacgacggcgtggtcggcagcgacggccaagtgaagctgaccgccggcgcgcttgag
aacgccgccggcaccatccaatccggcaaggacctgcaactgaccgccgcgtcgctgacc
aacgccaacaagggccagatcctggcgttgggcaaggatgccgccagcaaggtggacgtc
agcggtgagctgcacaaccaaggcaagttggccggtaacgccgacctgaccgtcaatgcc
gccagcatcgacaacagcaagggcacgctgcaggcggccagccatctggagttgagcaag
caaagcagcctcaccaacgatggcggccacatcgccggccagagtttgatgctgaacgcc
gacagcctgagcaaccaggccggcgagatctacgcccagcagcagctgagcagcacgctg
aagacgctgaacaatgcccaaggcagcctgatcggcggccagggtgtcgacctgacggtt
tttgaccagttgcataacgatggtgtgctgggcagcgacggccaagtgaagctgagcgcc
ggcacgctggagaacgccgccggcaccatccagtccggcaaggacctgcagcttaccgct
agtagcctgagcaacgccgacaagggccagatcctggtgttgggtaaggatgccgccagc
aaggtggacgtcagcggtgagctacacaaccaaggcaagttggccggcaatgccgatttg
accgtcaacgcggccagcatcgacaacagcaagggcacgctgcaggcggcggctggcttg
aatctgaccaagcaaagcagcctgatcaatgacggcggccatattaccagccagagcctg
aaactgaacgccgactcgctcagcaaccaggcgggcgagatctatgcccagcagcaactc
accagccagctgaagaccctcgacaatgccaagggcagcgtcatcggcggccagggtgtc
gacctgacggtgaccgacagcctgcgcaacgacggcgtggtcggcagcgacggccaagtg
aagctgaccgccggcgcgcttgagaacgccgccggcaccatccaatccggcaaggacctg
caactgaccgccgcgtcgctgaccaacgccaacaagggccagatcctggcgttgggcaag
gatgccgccagcaaggtggacgtcagcggtgagctgcacaaccaaggcaagttggccggt
aacgccgacctgaccgtcaatgccgccagcatcgacaacagcaagggtacgctgcaagcg
gccagccatctggagttgagcaagcaaagcagcctcaccaacgatggcggccacatcgcc
ggccagagtttgatgctgaacgccgacagcctgagcaaccaggccggcgagatctacgcc
cagcagcagctgagcagcacgctgaagacgctgaacaatgcccaaggcagcctgatcggc
ggccagggtgtcgacctgacggtttttgaccagttgcataacgatggtgtgctgggcagc
gacggccaagtgaagctgagcgccggcacgctggagaacgccgccggcaccatccagtcc
ggcaaggacctgcagcttaccgctagtagcctgagcaacgccgacaagggccagatcctg
gtgttgggtaaggatgccgccagcaaggtggacgtcagcggtgagctacacaaccaaggc
aagttggccggcaatgccgatttgaccgtcaacgcggccagcatcgacaacagcaagggc
acgctgcaagcggccagccatctggagctgagcaagcaaaccagcttgatcaacgacggc
ggccacattgcaagtcagagcctgaaactgaacgccgacagcctgagcaaccagacgggc
gagatctacgcccagcagcaactgagcagccaactgaagaccctcgacaatgccaagggc
agcgtcatcggcggccaaggcgtcgacctgacggtgaccgaccagttgcataacgatggc
gtggtcggcagcgacggccaagtgaaattgagcgtcggcacgctggagaacgccgccggc
accatccaatccggcaaggacctgcaactgagcgcatcgtcgctgaccaacgccgataaa
ggccagattctcgccctgggcaaagacgcggcgagcaaggtgggtgtcagcggcgagctg
cgcaaccagggcaagctggccggcaatgccgatctgaccgtcaacgcggcgagcattgac
aacagcaagggcacgctgcaggcggctagtcatctggagctgtcgaaacaatccagcctg
atcaacgacggtgggcatatcgctggccagagcctgaaactgaatgccgacagcctgagc
aaccaggccggcgagatctacgcccagcagcagttgagcagcacgctgaagacgctgaac
aatgcccaaggcagcctgatcggcggccaaggcgtcgacctgacggtggccgacagcctg
cataacgacggcgtggtaggcagcgatggccaagtcaaactcaatgccggcgcgctggag
aatgccgctggcacgattcaatcggggaaagatttacagctcacggcgtcaagtctgacg
aatgctgacaaaggccagattctggcgctgggcaaggacgccgccagcactgttgacgtc
agcggcgagctgcataaccagggcaaagtcgccggcaacgccgatctgaccgtcaacgcc
gccagcatcgacaacagcaagggcacgctgcaggcggcggctggcttgaatctgaccaag
caaagcagcctgatcaatgacggcggccatattaccagccagagcctgaaactgaacgcc
gactcgctcagcaaccaggcgggcgagatctacgcccagcagcaactgagcagccaactg
aagaccctcgacaatgccaagggcagcgtcatcggcggccaaggcgtcgacctgacggtg
accgaccagttgcataacgatggcgtggtcggcagcgacggccaagtgaagctgaccgcc
ggcgcgcttgagaacgccgccggcaccatccaatccggcaaggacctgcaactgaccgcc
gcgtcgctgaccaatgccgaaaaaggccagattctcgccctgggcaaagacgcggcgagc
aaggtggatgtcagcggcgagctgcacaaccagggcaagctggccggtaacgccgacctg
accgtcaacgcggcgacgattgataacgccaagggcaccttgcaggcagcgaaccatctg
gagttgagcaagcaaagcagcctgaccaacgatgacggccacatcgctggccagagtttg
acgctgaaggccgattcgctgagcaataagagcggcgaactgtacgctcagggccagctc
accagccaactgaagacgctcgacaacagccaaggcagcctgatcggcggccaaggcgtc
gacctgacggtggccgacagcctgcataacgacggcgtggtaggcagcgacggccaagtg
aagctgagcgccggcacgctggacaatgccgccggcaccatccaatccggcaaggacctg
caactgaccgccgcgtcgctgaccaacgccgacaagggccagatcctggcgttgggcaag
gatgccgccagcactgttgacgtcagcggtgagctgcacaaccaaggcaagttggccggc
aacgccgatctgaccgtcaacgcggcgagcattgacaacagcaagggcacgctgcaggcg
gctagtcatctggagctgtcgaaacaatccagcctgatcaacgacggcggccatatcgcc
ggccagagtttgaagctgaacgccgacagcctgagcaactag
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integrated database retrieval system