Chromobacterium violaceum: CV_3195
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Entry
CV_3195 CDS
T00147
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CV_3195 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_3195 (alkA)
Enzymes [BR:
cvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CV_3195 (alkA)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CV_3195 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
AAQ60861
LNCC_Brazil:
CV3195
UniProt:
Q7NT66
LinkDB
All DBs
Position
complement(3479397..3480290)
Genome browser
AA seq
297 aa
AA seq
DB search
MSVIDCDIALPAGFRPQDILAFHRRDGERLAEQVDDDGLRKGLLWQGLPACLDLRFRPGW
AVLRLDVDGGAAEARALEDIGRRMLGLNQPVEAFERRYRDHPQLGGLIAARAGLRVPQTA
TPFEALAWAITGQQISVAAAVTIRRRLLQLCDCRHSSGLLCHPDAPRLAALTADQLGEAG
FSRAKSRALLALSQGAASGALPLDGWLDGAPAEEIAERLLAVPGIGPWTVSYALLRGYGW
LDGSLHGDVAVRKALGMALGMADKPDQKQAQQWLDAFSPWRALVAAHLWASLQAGGF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcatcgattgcgatatcgcgctgccggccggcttccggccgcaggacatcctg
gccttccaccgtcgcgacggcgagcgcctcgccgagcaggtggacgacgacggcctgaga
aagggcctgttgtggcaaggcctgcccgcctgcctagacttgcgcttccggcccggctgg
gccgtcctcaggctggatgtcgacggcggggcggcagaggcccgggcgctggaggacatc
ggccggcgcatgctgggcctgaaccagccggtggaggcgttcgagcgccgataccgcgac
catccccaactgggcggcctgatcgccgcgcgcgccggcctcagggtgccgcagacggcc
acgccgttcgaggcgctggcctgggcgatcaccggccagcagatcagcgtggcggcggcg
gtgacgatacggcggcggctgctgcaattgtgcgattgccgccattcttccggcctgctg
tgccacccggacgcgccgcggctggcggcgctgacggcggatcaactgggcgaggccggc
ttttcccgcgccaagagccgggccttgctggcgctgagccagggcgcggcgagcggcgcg
ctgccgctggatggctggctggacggcgcgccggcggaggagatcgccgagcggctgctg
gcggtgccgggcatcgggccatggacggtcagctacgcgctgttgcgcggctacggctgg
ctggacggctcgctgcacggcgacgtggcggtgcgcaaggcgctgggcatggcgctgggc
atggccgacaagcccgaccagaagcaggcgcagcagtggctggacgcgttctcgccgtgg
cgggcgctggtggccgcccacctgtgggcatcgctgcaggcggggggattctga
DBGET
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