Chromobacterium violaceum: CV_3229
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Entry
CV_3229 CDS
T00147
Name
(GenBank) conserved hypothetical protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
cvi
Chromobacterium violaceum
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_3229
Enzymes [BR:
cvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CV_3229
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CV_3229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AAQ60894
LNCC_Brazil:
CV3229
UniProt:
Q7NT35
LinkDB
All DBs
Position
3511057..3512751
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AA seq
564 aa
AA seq
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MSDVGCGIQGQQGGVAVQALRRLRPNHELAQKMARQLGRCPVLLRALPPPERQSRMTTLR
LILGDQLNPRHSWFAEPDANVVHVMMEIRQETDYVRHHAQKILAIFAAMRDFAAQLKAQG
HRVRYVAIDDASNRQSLIGNLDALIAHYRAAAVEYQAPDEWRLDRQLAEWAAGLPIPCRM
ADSEHFYTARGEAAAFFGARRQWRQETLYRHLRRQHGILMDDNGEPAGGRWNFDADNRQR
WPGHPPEPNDARPEHDHSRLWQTIVDAGVDSFGQPQADALRWPLNRAEALAQLRAFVEHA
LPHFGAYQDAMSPRARRLFHSLLSFALNVKMLNPREAVDAAVAAWRRGDAPLAAVEGFAR
QLLGWREYVRGVYWAKMPGYRDSNALDHRLPLPRWFWDGDTGMRCLAHAIGQSLEDAYAH
HIQRLMVIGNFGLIAGLSPQALHEWYLGVYIDAFEWVELPNTLGMSQFADGGLLGSKPYA
GSAAYIGRMGDYCAGCRYRPKQRVGADACPFNALYWDFFQRHRARLAANPRLALVYRQLD
KLPEAERAAISARAAALQADLDAL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgatgtcggctgcggcattcaagggcaacaaggcggcgttgccgtccaagccctg
cgccggctgcggccgaaccatgagctggcgcaaaaaatggcgcgccagctgggacgctgt
ccagtattgctccgagcgctgccgccgccggaaaggcaaagccgcatgaccaccttgcgg
ctgatcctgggcgaccagctcaatccccgccacagctggttcgccgagcccgacgccaac
gtggtgcatgtgatgatggaaatccgccaggaaaccgattacgtgcgccaccacgcgcag
aaaatcctggccatcttcgccgcgatgcgcgacttcgccgcccagttgaaagcgcaaggc
caccgcgtgcgctacgtggccatagacgacgccagcaaccgccagtcgctgatcggcaat
ctggacgcgctgatcgcccattaccgcgcggcggcggtggagtaccaggccccggacgag
tggcggctggaccgccagctcgcggaatgggcggccggcctgcccataccctgccgcatg
gcggacagcgagcacttctacaccgcgcgcggcgaggcggcggcgttcttcggcgcgcgg
cggcaatggcggcaggagaccctataccgtcacctgcggcgccagcacggcattttgatg
gacgacaacggcgagcccgccggcgggcgctggaatttcgacgccgacaaccgccagcgc
tggcccggccacccgcccgaaccaaacgatgcgcgtcccgagcatgaccacagccggctg
tggcaaaccattgtcgacgccggggtggacagcttcggccagccgcaggcggacgccctg
cgctggccgctcaaccgcgccgaggcgctggcgcagctgcgcgccttcgtcgaacacgcg
ctgccgcatttcggcgcctaccaggacgcgatgagcccgcgcgcgcggcggctgttccat
tcgctgctgtccttcgccctcaatgtgaaaatgctgaatccgcgcgaggcggtggacgcc
gccgtcgccgcctggcgccggggggacgcgccgctggccgcggtggaaggcttcgcgcgg
cagctgctgggctggcgcgagtacgtgcgcggcgtgtactgggccaagatgcccggctac
cgcgacagcaacgcgctggatcaccggctgccgctgccgcgctggttttgggacggcgac
accggcatgcgctgcctcgcccacgccatcggccaatcgctcgaagacgcctacgcccac
cacatccagcggctgatggtgataggcaatttcggcctgatcgccggcctgtcgccgcag
gcgctgcacgaatggtatctgggcgtctacatcgacgccttcgaatgggtggagctgccc
aacacgctgggcatgagccagttcgccgacggcgggctgctgggcagcaagccttacgcc
ggcagcgccgcctatatcggccgcatgggcgattactgcgccggctgccgctatcggccc
aagcagcgcgtcggcgccgacgcctgcccgttcaatgccttgtactgggattttttccag
cgccaccgcgcgcggctggccgccaatccgcggctggcgctggtctaccgccagctggac
aagctgccggaagccgaacgcgccgccatctccgcgcgcgccgccgcgctgcaagccgat
ctagacgcactgtga
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