Chromobacterium violaceum: CV_3332
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Entry
CV_3332 CDS
T00147
Symbol
rpoN
Name
(GenBank) RNA polymerase N (sigma54) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cvi
Chromobacterium violaceum
Pathway
cvi02020
Two-component system
cvi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CV_3332 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CV_3332 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvi03021
]
CV_3332 (rpoN)
Transcription machinery [BR:
cvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CV_3332 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_23
HTH_38
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AAQ60996
LNCC_Brazil:
CV3332
UniProt:
Q7NST8
LinkDB
All DBs
Position
3630106..3631506
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AA seq
466 aa
AA seq
DB search
MKQALQLKVSQQLTLTPQLQQSIKLLQLSTLDLQAEVERFLLDNPLLERGDEPRDGEAPG
DGPEQQDSPVEAQEADSRDDGAGELLDWGAGARKGDDDDFDPMLNVPCPISLREHLLTQL
GELALTDRDRAVVSLLIEELDDDGYLPLGLDELAGNLPLELELDSDELAVGLALLQQFDP
AGVGARSLAESLTLQLRRLPGDEPGHALALAIVREHLALLGGRDYARLKKLLRCDDAALR
DAQALIARLNPHPATGFGHGDVHYVIPDISVRKLRGRWTAELNRAAMPRLRVNRLYERML
ADHRAGGEMSGRLQEARWLVKNIQQRFDTILKVAEAIVERQQLFFEHGEVAMRPLILRDI
AEELGLHESTVSRSTSQKYLLCSRGLFELKYFFGSSLETESGGECSATAIKAHIRGMIDA
EDRAKPLSDSAIADALAKQGIQVARRTVAKYREAMQIPAVNLRKAL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggcccttcagctcaaggtatcccagcaactgacgctgacgccgcagctgcag
cagtcgatcaagctgctgcagctgtccacgctggatctgcaggcggaagtggaacgcttc
ctgctcgacaatccgctgctggagcgcggcgacgagccccgcgacggcgaggccccgggc
gacggccccgaacagcaggacagcccggtcgaagcgcaggaagccgatagccgcgacgac
ggcgccggcgagctgctggactggggcgcgggcgcacgcaagggggacgacgacgacttc
gaccccatgctcaacgtgccctgccccatcagcctgcgcgagcacctgctgacccagctg
ggcgagctcgccctcaccgaccgcgaccgcgcggtggtcagcctgctgatcgaggagctg
gacgacgacggctacctgccgctgggactggacgaactggccggcaacctgccgctggaa
ctggagctggacagcgacgagctggcggtgggcctcgcgctgctgcagcagttcgacccg
gccggcgtcggcgcccgctcgctggccgaatcgctgacgctgcagctgcggcgcctgccg
ggagacgagcccgggcacgcgctggcgctggccatcgtccgcgagcatctggcattgctg
ggcggacgcgactacgccaggctgaaaaagctgctgcgctgcgacgacgccgcgctgcgc
gacgcgcaggcgctgatcgccaggctcaacccccatcccgccaccggcttcggccacggc
gacgtccactacgtgatccccgacatcagcgtacgcaagctgcgcggccgctggaccgcc
gagctcaaccgcgccgcgatgccccgcctgcgggtcaaccggctgtacgaacggatgctg
gccgaccaccgcgccggcggcgaaatgtcgggccgtctgcaggaggcgcgctggctggtc
aagaacatccagcagcgatttgacaccatactcaaagtggcggaagctattgtcgagcgt
caacagttgttctttgagcacggcgaagtggcgatgcgcccgctgattctgcgggacatc
gcggaagagctgggcctgcacgaatccaccgtttcccgatccaccagccagaaatacctg
ctctgttcgcggggtttgttcgagctcaagtatttcttcggcagttcgctggaaactgaa
agcggcggcgagtgctccgccaccgcgatcaaggcccatatccgcggcatgatagacgcc
gaggaccgcgccaagccgctgtccgacagcgccatcgccgacgcgctggccaaacaggga
attcaggttgccagacgcaccgtagccaagtatcgtgaagccatgcagattccggcggtg
aatctgcgcaaggcgctgtag
DBGET
integrated database retrieval system
