Chromobacterium violaceum: CV_3394
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Entry
CV_3394 CDS
T00147
Name
(GenBank) probable cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi00260
Glycine, serine and threonine metabolism
cvi00270
Cysteine and methionine metabolism
cvi00450
Selenocompound metabolism
cvi00670
One carbon pool by folate
cvi01100
Metabolic pathways
cvi01110
Biosynthesis of secondary metabolites
cvi01230
Biosynthesis of amino acids
Module
cvi_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CV_3394
00270 Cysteine and methionine metabolism
CV_3394
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CV_3394
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CV_3394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvi04147
]
CV_3394
Enzymes [BR:
cvi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CV_3394
Exosome [BR:
cvi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CV_3394
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AAQ61058
LNCC_Brazil:
CV3394
UniProt:
Q7NSM7
LinkDB
All DBs
Position
complement(3687960..3689102)
Genome browser
AA seq
380 aa
AA seq
DB search
MTDFHTLAVTAGAHEDPFGAVMPPIYATSTYRQHAPGEHTGYEYSRSQNPTREALERAVA
ELEGGIRGYAFGSGLAAISTVLELLPAGSHLIAVNDLYGGTYRLFEKVRKASANLEVTYV
ASDDSAALEAAIRPNTRMIWVETPSNPLNQLVDLQQVSAIARRHKLIGVVDNTFASPVNQ
RPLDFGFDIVVHSATKYLNGHSDVVAGVAVVSRDQPELAEQLAFLHNAVGAILDAFPSFL
VLRGLRTLALRIEQHNRNGLAIARWLEAQPWVEKVLYPGLESHPQHALARRQMQGYGGIV
SFYLKGDVKAFLARLKLFALAESLGGVESLVCLPAAMTHASIPAERRAALGIHDNLIRLS
VGVEGEAALIADLEQARRDS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttccacaccctggccgtgaccgccggcgcgcacgaggacccgttcggcgcg
gtgatgccgccgatctacgccacctccacctaccgccagcacgcgccgggcgagcacacc
ggctacgagtattcccgctcgcagaacccgacccgcgaggcgctggagcgcgcggtggcc
gaactggaaggcggcatccgcggctacgctttcggctccggcttggcggcgatctccacc
gtgctggagctgctgccggccggcagccacctgatcgcggtcaacgacctgtacggcggc
acctatcgtctgttcgagaaggtgcgcaaggccagcgccaacctggaagtgacctatgtc
gcctccgacgacagcgccgcgctggaggccgccatccgcccgaacacccggatgatctgg
gtggaaacgccgtccaatccgttgaaccagctggtggacctgcaacaggtgtcggccatc
gcccgccgccacaagctgatcggcgtggtcgacaacactttcgcctcgccggtcaaccag
cggccgctggacttcggcttcgacatcgtcgtccactccgccaccaaatacctgaacggc
cattccgacgtggtggccggcgtggctgtggtcagccgcgaccagccggaactggccgaa
cagctggccttcctgcataacgcggtgggcgccatcctggacgccttccccagcttcctg
gtgctgcgcggcttgcgcacgctggcgctgcgcatcgagcagcacaaccgcaacggcctg
gccatcgcgcgctggctggaggcgcagccttgggtggaaaaggtgctgtacccaggcttg
gaaagccatccgcagcacgcgctggcgcgccgccagatgcagggctacggcggcatcgtg
tcgttctatctgaagggcgacgtcaaggccttcctggccaggctcaagctgttcgcgctg
gccgaaagcctgggcggcgtcgaaagcctggtctgcctgccggcggcgatgacccacgcg
tcgattccggccgagcgccgcgccgcgctcggcatccacgacaacctgatccgcctgtcg
gtcggcgtcgagggcgaggcggcgctgatcgccgacctggagcaggcgcggcgggacagc
tga
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