Chromobacterium violaceum: CV_3454
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Entry
CV_3454 CDS
T00147
Name
(GenBank) probable DNA-directed DNA polymerase, bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CV_3454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_3454
Enzymes [BR:
cvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CV_3454
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CV_3454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAQ61115
LNCC_Brazil:
CV3454
UniProt:
Q7NSH2
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All DBs
Position
3750716..3751558
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AA seq
280 aa
AA seq
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MSRASLLQQEMGLGPAWMARGGWFEQHPAQRLREQTQADDAESGMPDPALEPRSLIPAPQ
ETASVAPPASNFSPPEQPQPAAEPLRAEVATESPLLDWPQLQRKVSDCQDCRLCETRTQT
VFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLDNMLSAAGLDREQDVYIANVLKC
RPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRFAAQTLLETESSIGRLRGKVHRY
QGLPLVVSYHPAYLLRNQPDKAKAWQDLLLARKVFLQASS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgccagcctgctgcaacaggaaatgggcctggggccggcctggatggcgcgt
ggagggtggttcgaacaacacccggcgcagcggctgcgcgaacagacgcaggcggacgat
gcggaatcaggcatgcccgatcccgccctggagccgcgctcgctcatcccagccccgcag
gagaccgcctcggtcgctccgccggcttccaacttctcgccccctgagcaaccgcagccg
gcggcggagccgctgcgcgccgaagtcgcaacagaatccccgctgttggactggccgcaa
ctgcagcgcaaggtgtccgactgccaggactgccgcctgtgcgagactcgcacccagacg
gtgttcggccgcggcaatccgcaagcccgctggatgctgataggagaagcgccgggcgag
aacgaggaccggcaaggcctgcctttcgtcggccgcgccggccagttgctggacaatatg
ctgtcggccgccggcctggaccgggagcaggatgtctatatcgccaacgtgctcaaatgc
cgcccgccaggcaaccgcaatcccgcgccggacgaaatcgccgcctgcaacggctacctg
ctgcagcagatccggcatatccagccgaccctgatcgtcgcgttgggccgcttcgccgcc
cagacgctgcttgagaccgagagctccatcggccggctgcgcggcaaggtgcaccgctat
caagggctaccgctggtggtcagctaccatcccgcctacctgctgcgcaaccaacccgac
aaggccaaagcctggcaggatctgctgctggcccgcaaggtattccttcaagccagttcc
tga
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