Chromobacterium violaceum: CV_3481
Help
Entry
CV_3481 CDS
T00147
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cvi
Chromobacterium violaceum
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_3481 (phrB)
Enzymes [BR:
cvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CV_3481 (phrB)
DNA repair and recombination proteins [BR:
cvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CV_3481 (phrB)
Prokaryotic type
CV_3481 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAQ61142
LNCC_Brazil:
CV3481
UniProt:
Q7NSE5
LinkDB
All DBs
Position
complement(3776451..3777866)
Genome browser
AA seq
471 aa
AA seq
DB search
MSKRYRTALVWLRRDLRLDDHAAFYHALKHSEAVLPVFVFDASILAALPRDDRRVDFIWQ
SAAALKAELNQLGGDLLIRHGLPQHEIPRLAAELGAEAVFCNRDYEPAARARDAEVAQRL
AEQGVAFRDSKDQVIFETDEVLTGAGKPFSVFTPYKNAWLKKLTPFHLQAYPVRRYLDAL
MPREPQSMPSLADIGFLPSDLASLPVKAGAAGAEALFADFAGRIERYKAQRDFPGVKGVS
YLSVHLRFGTLSIRRLAAYAWHDGGEGAMTWLSELIWRDFYQQVLWHRPDAAKHAFKPEY
DALPFPNDPEWFDAWREGRTGYPLVDAAMRQLNRSGYMHNRLRMVAASFLVKDLLIDWRW
GEQYFAEKLLDFDLAANNGGWQWAASTGCDAQPYFRIFNPVSQSEKFDPDGRFIRRYVPE
LAALPDKLIHAPWQAKPEQLMSAGVRLGRDYPHPIVDHAVQRELALALFKR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgttatcggacggccttggtctggctgcgccgcgacctgcggctggacgac
cacgccgctttttaccatgcgctgaagcacagcgaggccgtgctgccggtgttcgtgttc
gatgcctcgatactcgcggccttgccgcgcgacgaccggcgcgtggatttcatctggcag
agcgcggcggcgctgaaggccgagctgaaccagctgggcggcgacctgctgatccgccat
ggcctgccgcaacacgagataccgcggctggcggcggaattgggcgccgaggcggtattc
tgcaaccgcgactacgagccggccgcccgcgcgcgcgacgccgaggtggcgcaacggctg
gccgaacagggcgtcgccttccgcgacagcaaagaccaggtgattttcgagaccgacgaa
gtcttgaccggggccggcaaaccgttctcggtgttcacgccgtacaagaacgcctggttg
aagaaactgacgccgttccacctgcaggcctacccggtgcggcgctatctggacgcgctg
atgccgcgtgaaccgcaatccatgcccagcctggccgatatcggtttcctgcccagcgat
ctggcctcgctgccggtcaaggccggcgcggccggggccgaggcgctgttcgccgacttc
gccggccgcatcgagcgctacaaggcgcagcgcgactttcccggcgtcaagggcgtgtcc
tatctcagcgtccacctgcgcttcggcactctctccatccgccggctggccgcctacgcc
tggcatgacggcggcgaaggcgcgatgacctggctgagcgagctgatctggcgcgacttc
taccagcaggtgctgtggcaccggcccgatgcggcgaagcacgcgttcaagccggagtac
gacgcgttgccgtttcccaacgatccggaatggttcgacgcctggcgcgaaggccgcacc
ggctacccgctggtggacgcggcgatgcgtcagctcaatcgcagcggctacatgcacaac
cgcttgcgcatggtggcggccagcttcctggtcaaggatctgctgatcgactggcgctgg
ggggagcagtactttgccgagaaactgctggacttcgacctggcggccaacaacggcggc
tggcagtgggcggccagcaccggttgcgacgcccagccttatttccgcatcttcaatccg
gtcagccagagcgagaagttcgaccccgacggccgcttcatccgccgttacgtgccggag
ctggcggcgctgccggacaagctgatccacgcgccgtggcaggccaagccggaacaactg
atgtcagccggcgtgcggctgggacgcgactatccgcatcccatcgtcgaccacgcggtt
cagcgcgagctggcgctggcgctgttcaagcgctga
DBGET
integrated database retrieval system
