KEGG   Chromobacterium violaceum: CV_3978
Entry
CV_3978           CDS       T00147                                 
Name
(GenBank) conserved hypothetical protein
  KO
K11900  type VI secretion system protein ImpC
Organism
cvi  Chromobacterium violaceum
Brite
KEGG Orthology (KO) [BR:cvi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cvi02044]
    CV_3978
Secretion system [BR:cvi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CV_3978
SSDB
Motif
Pfam: VipB VipB_2 DUF3386 Antimicrobial_7
Other DBs
NCBI-ProteinID: AAQ61640
LNCC_Brazil: CV3978
UniProt: Q7NR07
LinkDB
Position
complement(4301678..4303156)
AA seq 492 aa
MSAELQQQAAPAAAEGVSLLDSIIEQSRIATNESEKSHTRDLIGELVDQVLQGSVTVSRD
LSASIDARIAEIDKLISDQLNNVMHHAEFQKLEASWRGLNYLVMQSETSTQLKIKVLNAS
KKDLVKDFKAAAEFDQSALFKKIYEEEYGTFGGAPYAALVGDYEFTRHPEDFYLLDELSH
VAASAHAPLISSADPGLFGLESFADIGKPRDLAKIFDTVEYAKWKSFRESEDSRYVGLVL
PHVLGRLPYGRDNVPVEEFDFEENVDGSNHDKYLWTNAAYAYAARLTDAFAQFGWLAAIR
GVEGGGLVEGLPAHTFKTDDGEVALKCPTEVAITDRTEKLLSDLGFISLVHCKNTDYAAF
FGGQSAQKAKTYNTDSANANARLSTQLPYIFAVSRIAHYMKSIMRDKIGSFASRQNVQDY
LNTWLAQYVLLDDSASQEAKAKYPLREARVDVVEVPGKPGVYRAAAFLRPHFQLDELTIS
LRLVAELPQPAG
NT seq 1479 nt   +upstreamnt  +downstreamnt
gtgagcgcggaattgcaacaacaggcggcgccggccgcggcggaaggcgtcagcctgctc
gacagcatcatcgagcagagccgcatcgccaccaatgaaagcgagaaaagccacacccgc
gacctgatcggcgaactggtcgaccaggtgctgcagggcagcgtcaccgtctcgcgcgac
ctgtcggccagcatcgacgcccgcatcgccgagatcgacaagctgatctccgaccagttg
aacaacgtgatgcaccacgccgagttccagaaactggaagcttcgtggcgcggcctgaac
tacctggtgatgcagtccgaaaccagcacccagctgaagatcaaggtgctgaacgcgtcc
aagaaggacttggtcaaggacttcaaggctgccgccgagtttgaccagagcgcgctgttc
aagaaaatctacgaggaagagtacggcaccttcggcggcgcgccttacgccgcgctggtg
ggcgactacgaattcacccgccacccggaagacttctacctgctggacgagctgtcccac
gtggccgcctccgcccacgcgccgctgatctcgtcggccgatccgggcttgttcggcctg
gaaagcttcgccgacatcggcaagccgcgcgatctggcgaagatcttcgacaccgtcgag
tacgcgaagtggaagtcgttccgcgaatcggaagactcccgctacgtcggcctggtgctg
ccgcatgtgctgggccgcctgccgtacggccgcgacaatgtgccggtcgaggaattcgat
ttcgaggaaaatgtcgacggcagcaaccacgacaaatacttgtggaccaacgcggcttac
gcctacgccgcgcgcctgaccgacgccttcgcccagttcggctggctggcggccatccgc
ggcgtggaaggcggcggcctggtggaaggcctgccggcccacaccttcaagaccgacgac
ggcgaagtggcgctgaagtgcccgaccgaggtggcgatcaccgaccgcaccgagaagctg
ctgtccgacctgggcttcatctcgctggtgcactgcaagaacaccgactacgcggccttc
ttcggcggccagtcggcgcaaaaggccaagacctacaacaccgactcggccaacgccaac
gcgcgcctgtccacgcagctgccgtacatcttcgcggtatcccgcatcgcgcattacatg
aagtccatcatgcgcgacaagatcggcagcttcgcttcgcgccagaacgtccaggactac
ctgaacacctggctggcccagtacgtgctgctggacgattccgccagccaggaagccaag
gccaagtacccgctgcgcgaagcgcgcgtcgacgtggtggaagtgcccggcaagccgggc
gtctaccgcgccgccgctttcctgcgccctcatttccagctcgacgagctgacgatttct
ttgcgtctggtggccgagctgccgcaaccggcgggctaa

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