Chromobacterium violaceum: CV_4014
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Entry
CV_4014 CDS
T00147
Symbol
groEL1
Name
(GenBank) chaperonin 60kD subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CV_4014 (groEL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvi03019
]
CV_4014 (groEL1)
03110 Chaperones and folding catalysts [BR:
cvi03110
]
CV_4014 (groEL1)
03029 Mitochondrial biogenesis [BR:
cvi03029
]
CV_4014 (groEL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvi04147
]
CV_4014 (groEL1)
Enzymes [BR:
cvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CV_4014 (groEL1)
Messenger RNA biogenesis [BR:
cvi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CV_4014 (groEL1)
Chaperones and folding catalysts [BR:
cvi03110
]
Heat shock proteins
HSP60 / Chaperonin
CV_4014 (groEL1)
Mitochondrial biogenesis [BR:
cvi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CV_4014 (groEL1)
Exosome [BR:
cvi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CV_4014 (groEL1)
Exosomal proteins of other body fluids (saliva and urine)
CV_4014 (groEL1)
Exosomal proteins of breast cancer cells
CV_4014 (groEL1)
Exosomal proteins of colorectal cancer cells
CV_4014 (groEL1)
Exosomal proteins of bladder cancer cells
CV_4014 (groEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AAQ61676
LNCC_Brazil:
CV4014
UniProt:
Q7NQX1
LinkDB
All DBs
Position
complement(4339962..4341602)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGDSARSKMVAGVNILADAVKVTLGPKGRNVVLDRSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVQEGMKFVAAGMNPMDLKRGI
DKAVVSLVGEIAKIAKPCATSKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVEDG
KSLNNELDVVEGMQFDRGYLSPYFINNQDKQIAALDNPFILLFDKKISNIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLTDIAVLTGGEV
IAEEVGLTLEKATLDQLGQAKRVEVGKENTTIIDGAGEAATIQARVGEIRKQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RARATLENLKTDNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGNFGYNA
ASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDKPAAGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaagttcggtgattccgctcgcagcaagatggttgccggcgtc
aacatcctggccgacgcggtcaaggttaccctgggtcccaagggccgcaacgttgtgctg
gaccgctccttcggcgcgccgaccatcaccaaggacggcgtgtcggtggccaaggaaatc
gaactgaaggacaagttcgagaacatgggcgcccagatggtcaaggaagtggcttccaag
acctccgacgtggccggcgacggcaccaccaccgccaccgtgctggctcaggccatcgtg
caggaaggcatgaagttcgtcgccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggctgtggtgtcactggtcggcgagatcgccaagatcgccaagccctgcgcgacc
tccaaggaaatcgcccaggtaggctccatctccgccaactccgatagcgatatcggcgaa
atcatcgccaatgcgatggaaaaagtgggcaaggaaggcgtgatcaccgttgaagacggc
aagagcctgaacaacgaactggacgtggtggaaggcatgcagttcgaccgcggttacctg
tccccgtacttcatcaacaaccaggacaagcagatcgccgccctggacaatccgttcatc
ctgctgttcgacaagaagatctccaacatccgcgacctgctgccggtgctggagcaagtg
gccaagtccggccgcccgctgctgatcatcgccgaagacgtcgaaggcgaagcgctggcc
actctggtggtgaacaccattcgcggcatcctgaaggtcgtggctgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctgaccgacatcgccgtgctgaccggcggcgaagtc
atcgccgaagaagtcggcctgactctggaaaaagccacgctggaccaactgggccaggcc
aagcgcgtcgaagtgggcaaggaaaacaccaccatcatcgacggcgccggcgaagccgcc
accatccaggctcgcgtgggcgagatccgcaagcagatcgaagaagccacttccgactac
gaccgcgagaagctgcaagagcgcgtggccaagctggccggcggcgttgccgtgatcaag
gtcggcgccgccaccgaagtggaaatgaaagagaagaaggcccgcgtcgaagacgcgctg
cacgccacccgcgcagccgttgaagaaggcgtggtgcccggtggcggcgtggccctgctg
cgtgcccgcgcgacgctggaaaacctgaagaccgacaatgccgaacaggaagctggcgtg
aagatcgtgctgcgcgcgatcgaagccccgctgcgccagatcgtcaagaacgccggcgac
gagccgtcggttgtcgtgaacaaggtgctggaaggcaagggcaacttcggttacaacgcc
gccagcggcgaatacggcgacatgctggaaatgggcgtgctggatccggccaaggtgacc
cgctccgctctgcagcacgccgcttccgtggccggcctgatgctgaccaccgactgcatg
atcgccgagctgccggaagacaagccggccgctggcatgccggacatgggcggcatgggc
ggcatgggcggcatgatgtaa
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