Chromobacterium violaceum: CV_4076
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Entry
CV_4076 CDS
T00147
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CV_4076 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_4076 (recB)
Enzymes [BR:
cvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CV_4076 (recB)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CV_4076 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_22
AAA_11
ResIII
DUF6668
Motif
Other DBs
NCBI-ProteinID:
AAQ61736
LNCC_Brazil:
CV4076
UniProt:
Q7NQR1
LinkDB
All DBs
Position
complement(4409925..4413515)
Genome browser
AA seq
1196 aa
AA seq
DB search
MNAPQALDALNCPLQGVNLIEASAGTGKTWTIAALFARLLLEERDGAPPPAIERILVVTY
TKAATAELRERLRRRLAEMLALLDGKADGDDFLRALAARFPEGPARDVARQRLTAAVNGF
DAAAIYTIHGFCQRVLTDAAFESGQTFQAELVEDDAARLAEIVDDFWRRRIVAAPLLAQV
LVERGETPDAWLAEIRPYLSKPYLKLRAPDAVRLENARWVASERWRLLASAPEQVEEGLA
LFLAHPGFKANIYRPDTMARAADNLRGWLAQPDALPELDSDSRKLLDKLRPEALAKGMKK
GCDAPAHPLFERMEAWLAAWDVYMDQVANSLAGLKLELIAWANEELARRRGVERSRSFDD
LLTDLGAALDHPATGPLLAAQVADSFSVALIDEFQDTDPTQYRIFRRCFVEEARPVFLVG
DPKQAIYSFRGADIFAYLAARHDAERQYTLDTNRRSDEPLVATVNALFGRELPFLLDGIA
YQPVAASPSSGGRLEVDDDRAPFNAQWLPAGEKELSKEAAELAAAEACADEIARLLTLAG
EDRAAIVKGASRRRLAGGDIAVLVATHSQGDRVRSELRARGVASVALTQESVFASREAGE
MLALLHAWAEPANEGRLRRALATELAGLDAARIQAELEDETRWERQLLKNADDHQRWREH
GFMAAWRHYFARERAAERLLPLPDGERRLTNLGHLAELIQQESEGRQGMAPLLAWFAARV
ADPPRGEDAVLRLESDAALVKIVTVHTSKGLQYPVVFCPFLWNGALERRGAGFWSYHDGD
EPWLAPEAAADDGIRQAARSEMLAEKLRLLYVALTRAQYRQYISWGWVRELKTAALSWLL
HAPGARDLAALEALELDGGTVAAQLRAFLDQRGGAARWLEAEGRQALAGGRDPGRAYAAL
PFERRLYAPWKIASFTSLTHDAGSHLAEAPDYDRAAAPAPAEPAADPVRDRFSFPRGAKA
GVCLHEIFENIGFGDAEDDIRAAVQRALARHGFGEEWLDAGCDLILGALNAEIAPGARLR
DVADHKRLIELEFTLPVKKLDVAALIAALQKPAHGLAEPFRRAAAGLDFASVQGFLKGFV
DLVCEAGGRVYLIDYKSNHLGDACDDYRDDSLVHAVAREHYYLQYLIYLVALRRYFAARG
ADWDGRFGGVRYLFLRGMGEPGCGVWADMPSTALLDALDALLAGSGTKRGPGSSTQ
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgcaggcgctggacgcgctgaactgcccgctgcaaggcgtcaacctgatc
gaggcctcggccggcaccggcaagacctggaccatcgccgcgctgttcgcccggctgctg
ctggaagagcgcgacggcgcgccgccgccggccatcgagcggatactggtggtcacctac
accaaggccgccaccgccgagctgcgcgagcggctgcgccggcggctggccgagatgctg
gcgctgctggacggcaaggccgacggcgacgacttcctgcgggcgctggccgcgcgcttt
cccgaggggccggcgcgcgacgtcgcccgccagcggttgaccgccgcggtcaacggcttc
gacgccgccgccatctacaccatccacggcttctgccagcgggtgttgaccgacgccgcc
ttcgagagcggccagaccttccaggcggaactggtcgaggacgacgccgcgcggctggcc
gagatcgtcgacgacttctggcgccgccgcatcgtcgccgcgccgctgctggcccaggtg
ctggtggagcggggcgagacgccggacgcctggctggccgagatccgtccctatctgtcc
aaaccctatcttaagctgcgcgcgccggacgcggtccggctggagaacgcgagatgggtg
gcgagtgagcgatggagactgctggcctccgcgccagagcaggttgaggaaggtctggca
ttgttcctcgcccatcccggcttcaaggccaatatctaccggccggatacgatggcgcgt
gccgccgacaatctgcgcggctggctggcgcagcccgacgcgctgcccgagctggacagc
gacagccgcaagctgctggacaagctgcggccggaggcgttggccaagggcatgaagaag
ggctgcgatgcgccggcccatcccttgttcgagcggatggaggcctggctcgccgcctgg
gacgtctatatggaccaggtggccaactcgctggccgggctgaagctggagctgatcgcc
tgggccaacgaggagctggcgcgccgccgcggcgtggagcgcagccgcagcttcgacgac
ctgctgaccgatctgggcgcggcgctggaccatccggcgaccggcccgctgctggcggcg
caggtggcggacagcttctccgtggcgctgatcgacgaattccaggacaccgaccccacc
cagtaccggattttccgccgctgcttcgtcgaggaggcgcggccggtgttcctggtcggc
gaccccaagcaggcgatctacagcttccgcggcgccgacatcttcgcttacctggccgcc
cgccacgacgccgagcgccagtacacgctggataccaaccgccgctccgacgagccgctg
gtggctaccgtcaacgcgctgttcggccgcgagctgccctttttgctggacggcatcgcc
taccagccggtggcggccagtccctcgtccggcggccggctggaggtggacgacgaccgc
gcgccgttcaacgcgcagtggctaccggccggcgaaaaagaattgagcaaggaggcggcc
gagctggcggcggcggaagcctgcgccgacgagatcgcccgcttgctgacgctggcgggc
gaggaccgcgccgccatcgtcaagggcgcgtcgcggcggcggctggccggcggcgacatc
gcggtgctggtggccacccacagccagggcgaccgggtgcggagcgagttgcgcgcgcgc
ggcgtggccagcgtggcgctgacccaggagagcgtgttcgccagccgcgaggcgggcgag
atgctggccctgctgcacgcctgggccgaaccggccaacgagggccggctgcggcgcgcg
ctggccaccgagctggccggcctcgacgccgcgcggatccaggccgaactggaagacgaa
acgcgctgggagcgccagctgttgaagaatgccgacgaccaccagcgctggcgcgagcat
ggcttcatggccgcctggcggcattatttcgcccgcgaacgggcggcggagcggcttttg
ccgctgccggacggcgagcggcggctgaccaatctcggccacctggccgagctgatccag
caggagagcgaaggccgccagggcatggcgccgctgctggcctggttcgccgcccgcgtc
gccgatccgccgcgcggcgaggacgcggtgctgcggctggagagcgacgccgcgctggtg
aagatcgtcaccgtccatacttccaagggcctgcagtatccggtggtgttttgccccttc
ctgtggaacggcgcgctggagcggcgcggcgccggcttctggagctatcacgacggcgac
gagccgtggctggcgccggaggcggccgccgacgacggcatccggcaagcggcgcggagc
gagatgctggccgagaagctgcgcctgctgtacgtggcgctgacccgcgcccaataccgg
cagtacatctcctggggctgggtgcgggagctgaagaccgcggcgctgtcctggctgctg
cacgcgccgggcgcgcgcgacctggcggcgctggaggcgctggagctggacggcggcacc
gtggcggcgcagctgcgggcctttctcgaccagcgcggcggcgcggcgcgctggctggag
gccgaggggcggcaggcgctggccggcggccgcgatcccggccgcgcctacgccgcgctg
ccgttcgagcgcaggctgtacgcgccgtggaagatcgccagcttcacctcgctgacccat
gacgccggcagccatctggccgaagcgccggactacgaccgcgcggcggcgcccgcgccg
gccgagccggcggcggacccggttcgggaccgcttcagctttccgcgcggggccaaggcc
ggcgtctgcctgcacgagattttcgagaacatcggcttcggcgacgcagaggacgacatc
cgcgcggcggtgcaacgcgcgctggcgcggcacggcttcggcgaggagtggctggatgcc
ggctgcgacctgatcctgggcgcgctgaacgcggagatcgcccccggcgcgcggctgcgc
gacgtggccgaccacaagcggctgatcgaactggagttcacgctgccggtgaagaagctg
gacgtggcggcgctgatcgccgcgctgcaaaagccggcgcacggcctggccgaaccgttc
cggcgcgccgccgccgggctggatttcgccagcgtgcagggttttctgaaaggtttcgtc
gacctggtgtgcgaggccggcggccgcgtctacctgatcgactacaagtccaaccatctg
ggcgacgcctgcgacgattatcgcgacgacagtctggtccacgcggtggcgcgggagcat
tattacctgcagtacctgatttacctggtggcgctgcggcgctacttcgccgcgcgcggc
gcggactgggacggccgtttcggcggcgtgcgctatctgttcctgcgcggcatgggcgag
cccggctgcggcgtgtgggccgatatgccgtccacggcgctgctggacgcgctggacgcg
ttgctggcgggatccggaaccaagagaggccctggtagttctacgcaatga
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