Chromobacterium violaceum: CV_4090
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Entry
CV_4090 CDS
T00147
Symbol
cviR
Name
(GenBank) transcriptional activator, LuxR/UhpA family of regulators
KO
K20334
LuxR family transcriptional regulator, quorum-sensing system regulator CviR
Organism
cvi
Chromobacterium violaceum
Pathway
cvi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CV_4090 (cviR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvi03000
]
CV_4090 (cviR)
Transcription factors [BR:
cvi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CV_4090 (cviR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
DUF2089
HTH_23
HTH_10
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AAQ61750
LNCC_Brazil:
CV4090
UniProt:
Q7NQP7
Structure
PDB
PDBj
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Position
4426249..4427046
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AA seq
265 aa
AA seq
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MVTSKPINARPLPAGLTASQQWTLLEWIHMAGHIETEGELKAFLDNILSQAPSDRIILVL
GRLNNQNQIQRMEKVLNVSYPSDWLNQYSQENFAQHDPIMRIHLGQGPVIWEERFSRAKG
SEEKRFIAEASSNGMGSGITFSAASDRNNVGSILSIGGKEPGRNAALVAMLNCLTPHLHQ
AAVRIANLPPASPSNMPLSQREYDIFHWMSRGKTNWEIATILNISERTVKFHVANVIRKL
NANNRTHAIVLGMHLAMTPRELVNG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggtgacttcaaaacccatcaatgcaagaccgctcccggccggcctcaccgcgtcgcag
caatggacattgctggagtggattcacatggccgggcatatcgaaaccgagggcgagctc
aaggccttccttgacaacatcctgagccaggccccgtccgaccgcatcattctggtattg
ggacgcctgaacaaccagaatcagatccagagaatggagaaggttctgaacgtcagctac
ccatccgactggctcaaccagtactcccaggaaaacttcgcccagcacgatcccatcatg
cgcatccacctgggccagggaccggtcatctgggaagagcgcttcagccgcgccaaaggc
tcggaggaaaagcgcttcatcgcggaagcctccagcaacggcatgggcagcggcatcacg
ttcagcgcggcctccgaccgcaacaacgtcggcagcatcctgtccatcggcggaaaggaa
cccggacgcaacgcggccttggtcgccatgctgaactgcctgacgccccatctgcatcag
gcagcggtccggatcgccaacctgccgccggcatcgcccagcaatatgccgctatcgcaa
cgcgaatacgacattttccattggatgagccgcggcaagaccaactgggaaatcgccacc
atcctcaacatcagcgagagaacggtgaagtttcacgtcgccaatgtgatccgcaagctc
aatgcgaataatcgtactcatgccatagtgcttggcatgcacttggcgatgacaccccgc
gagttagtgaacggataa
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