Chromobacterium violaceum: CV_4160
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Entry
CV_4160 CDS
T00147
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase (alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cvi
Chromobacterium violaceum
Pathway
cvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CV_4160 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvi03021
]
CV_4160 (rpoA)
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_4160 (rpoA)
Enzymes [BR:
cvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CV_4160 (rpoA)
Transcription machinery [BR:
cvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CV_4160 (rpoA)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CV_4160 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AAQ61821
LNCC_Brazil:
CV4160
UniProt:
Q7NQH7
LinkDB
All DBs
Position
complement(4502011..4502994)
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSASEFLKPRLIDVQPVSATHARVSMEPFERGYAHTLGNSLRRILLSSMPGYAPTEVT
IAGVLHEYSALDGVREDVVDILLNLKGVVLKLHGRDSVVLTLKKEGEGAVLASDIELPHD
VEVINPEHVICHISSGGKIDMEVKVEKGRGYQPVSARTSHDDNRSIGTIQLDASFSPVRR
VSFAVESARVEQRTDLDRLVLDIETNGVIEPEQAVRNAARILMDQLSIFADLQGTAVEEV
VEKAPPIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGMKLENWPPAGLEKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcgcttcggaatttctgaaacctcgtctgatcgacgtacagccggtttcc
gccactcacgctcgcgtgtcgatggagccgttcgagcgcggctatgcccataccctgggc
aattcgctgcgccgtatcctgctgtcgtcgatgccgggctatgctccgaccgaagtgact
atcgctggcgttttgcatgagtattccgcgcttgatggcgtgcgcgaggatgtcgtcgac
atcctcctcaacctcaagggcgtagtgcttaagctgcatggtcgcgacagtgtcgtgctg
accttgaaaaaggaaggcgagggcgctgtcttggctagcgatatcgagctgccgcatgat
gtggaagtgatcaatccggaacacgtgatttgtcacatctcctccggcggcaagatcgac
atggaggtcaaggtggagaagggccgcggctatcagccggtgtccgctcgcaccagccat
gacgacaaccgttccatcggtaccatccaactggacgcttccttctcgccggtccgccgc
gtgagcttcgctgtggaaagcgcccgcgtggaacagcgtaccgacctcgaccgcctggtt
ctcgatatcgagaccaacggcgtgatcgagccggagcaggctgtgcgcaacgcagcccgc
atcctgatggatcagctgtcgatctttgccgacctccagggcacagcggttgaagaagtc
gttgaaaaggcgccgccgatcgatccgatcctgctgcgtccggtagacgatcttgaactg
acggtccgttcggccaactgcctgaaagcagagaacatttattacatcggcgatctgatc
cagcgcaccgaaaccgagcttctgaagactccgaacctcggccgcaagtcgctgaacgag
atcaaggaagttctcgcttccaagggcctgactctcggcatgaagctcgagaattggcct
ccggctggtctggaaaagccgtaa
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