Chromobacterium violaceum: CV_4269
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Entry
CV_4269 CDS
T00147
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cvi
Chromobacterium violaceum
Brite
KEGG Orthology (KO) [BR:
cvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvi03032
]
CV_4269 (topA)
03400 DNA repair and recombination proteins [BR:
cvi03400
]
CV_4269 (topA)
Enzymes [BR:
cvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CV_4269 (topA)
DNA replication proteins [BR:
cvi03032
]
Prokaryotic type
DNA Topoisomerases
CV_4269 (topA)
DNA repair and recombination proteins [BR:
cvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CV_4269 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AAQ61929
LNCC_Brazil:
CV4269
UniProt:
Q7NQ71
LinkDB
All DBs
Position
4602812..4605121
Genome browser
AA seq
769 aa
AA seq
DB search
MPTSLLIVESPSKAKTLKKYLGPDFEVLASYGHVRDLVPKNGAVDPEKDFAMKYQLIARN
SKHVDAIVSAVREADHVYLATDPDREGEAISWHLVQILNSKKLLKDKTAQRVVFHEITKN
AVLDAIQNPRDIAQDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIKAFVQQEYWSVHLDSHKSRTKFSAKLTTLGGKKLDQFDIPNEAEQASVLARLQG
LPATVGSIEKKKKSRSPAAPFTTSTLQQEAVRKLGMTTDRAMRTAQQLYEGMDIGQGTVG
LITYMRTDSVALANEAVEEIRGYIGLKWDADYLPKNPAVYKSKAKNAQEAHEAIRPTSIL
RTPEMVKPFLTTDQFKLYDMIWKRTLACQMAPAKFDTTSVDIMVGEGVFRASGQVQTFAG
FLAVYEEDVDDAEDEDNAKLPLLTEGEDLPVDKLYGEQHFTQPPPRFSEASLVKALEEFG
IGRPSTYASIISTLKDREYVILDKKRFLPTDTGDIVNKFLTEHFAQYVDYNFTAKLENQL
DEIANGGRQWVPVMDTFWKGFKKQIDEKESISRAEVTTESLDEDCPKCGKPLSIKFGKRG
RFIACTGYPECDYTRNMGETAEQAAEEAEAPTVIEGRSCPDCGGELHIKKGRYGKFIGCA
NYPKCKHIEPLEKPRETGVTCPECKTGQLIERKSRYGKLFYSCNTYPKCKYATWNPPIAE
PCPQCNWPILTIKTTKRRGTEKVCPQKECGYAEQIAPPEGKDAAPAEEA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccagcctcctgatcgtcgagtcgccatccaaggcgaagacgctgaaaaaatac
ctgggcccggacttcgaggtcctggcctcctacggccacgtgcgcgacctggtgccgaag
aacggcgccgtcgatccggaaaaagacttcgcgatgaagtaccagctgatcgcgcgcaac
agcaagcacgtcgacgccatcgtcagcgcggtgcgcgaggccgaccacgtttacctggcg
actgacccggaccgcgaaggcgaagccatttcctggcacctggtgcagatcctcaacagc
aagaagctgctgaaggacaagaccgcccagcgcgtggtgttccacgagatcaccaagaac
gcggtgctggacgcgatccagaacccgcgcgacatcgcgcaggacctggtggacgcgcag
caggcgcgccgcgcgctggactacctggtgggcttcaacctgtcgccgctgttgtggaag
aagatccgccgcggcctgtccgccggccgcgtgcagagcccggccttgcgcctgatctgc
gaacgcgagaacgagatcaaggccttcgtgcagcaggaatactggtcggtccacctggac
agccacaagagccgcaccaagttcagcgccaaactgaccacgctcggcggcaagaaactg
gaccagttcgacatcccgaacgaggccgaacaggcgtcggtgctggcccgcctgcagggc
ctgccggccaccgtgggcagcatcgagaagaaaaagaaatcgcgcagcccggccgcgccg
ttcaccacctccacgctgcagcaggaggccgtgcgcaagctcggcatgaccaccgaccgc
gcgatgcgcaccgcgcagcagctgtacgagggcatggacatcggccagggcaccgtcggc
ctgatcacctatatgcgtaccgactcggtggcgctggccaatgaagcggtggaggaaatc
cgcggctacatcggcctgaaatgggacgccgactacctgccgaagaacccggcggtctac
aagagcaaggccaagaacgcccaggaggcgcacgaagccatccgcccgacctccatcctg
cgcacgccggagatggtcaagcccttcctgaccaccgaccagttcaagctgtacgacatg
atctggaagcggacgctggcctgccagatggcgccggccaagttcgacaccaccagcgtc
gacatcatggtcggcgagggcgtgttccgcgccagcggccaggtgcagaccttcgccggc
ttcctcgccgtgtacgaggaggatgtcgacgatgccgaggacgaagacaacgccaagctg
ccgctgctgaccgagggcgaggatctgccggtggacaagctgtacggcgagcagcacttc
acccagccgccgccgcgcttctccgaagccagcctggtgaaggcgctggaagaattcggc
atcggccgtccgtccacctacgccagcatcatctcgacgctgaaggatcgcgagtacgtg
atcctggacaagaagcgcttcctgccgaccgataccggcgacatcgtcaacaagttcctg
accgagcacttcgcccagtacgtcgactacaacttcaccgccaagctggaaaaccagctg
gacgagatcgccaacggcggccgccaatgggtgccggtgatggacaccttctggaagggc
ttcaagaagcagatcgacgagaaggaaagcatctcccgcgccgaagtcaccaccgaaagc
ctggacgaggactgcccgaaatgcggcaagccgctgtcgatcaagttcggcaagcgcggc
cgcttcatcgcctgcaccggctacccggaatgcgattacacccgcaacatgggcgaaacc
gccgagcaggcggccgaggaggcggaagcgccgacggtgatcgaaggccgttcctgcccg
gactgcggcggcgagctgcacatcaagaaaggccgctacggcaaattcatcggctgcgcc
aactatccgaagtgcaagcacatcgagcctttggagaagccgcgcgaaaccggcgtcacc
tgcccggaatgcaagaccggccagctgatcgagcgcaagagccgctacggcaagctgttc
tacagctgcaacacctatccgaagtgcaagtacgcgacctggaacccgccgatcgccgag
ccgtgcccgcagtgcaactggccgatcctgacgatcaagaccaccaagcgccgcggcacc
gagaaggtgtgcccgcagaaggaatgcggctacgccgagcagatcgcgccgccggaaggc
aaggacgccgcgcccgccgaagaggcgtaa
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