Calliphora vicina (urban bluebottle blowfly): 135948802
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Entry
135948802 CDS
T10781
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03030
DNA replication
cvj03410
Base excision repair
cvj03420
Nucleotide excision repair
cvj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135948802
03410 Base excision repair
135948802
03420 Nucleotide excision repair
135948802
03430 Mismatch repair
135948802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvj03032
]
135948802
03036 Chromosome and associated proteins [BR:
cvj03036
]
135948802
03400 DNA repair and recombination proteins [BR:
cvj03400
]
135948802
DNA replication proteins [BR:
cvj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135948802
DNA Replication Termination Factors
ELG1-RFC complex
135948802
Chromosome and associated proteins [BR:
cvj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135948802
DNA repair and recombination proteins [BR:
cvj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135948802
Check point factors
HRAD17(Rad24)-RFC complex
135948802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_16
AAA_lid_RFC1
AAA_22
AAA_assoc_2
AAA_11
AAA_24
Mg_chelatase
Rad17
DUF815
AAA_30
Gp44_lid
AAA_14
AAA_19
DNAX_ATPase_lid
AAA_5
bpMoxR
RuvB_N
SLFN-g3_helicase
AAA_18
AAA_7
AAA_28
MCM
AAA_25
ResIII
AAA_3
Motif
Other DBs
NCBI-GeneID:
135948802
NCBI-ProteinID:
XP_065354326
LinkDB
All DBs
Position
1:19660938..19662443
Genome browser
AA seq
359 aa
AA seq
DB search
MQAFLKTGKTTTTDRSQASTSTGQQSGERRKPPAPWVEKYRPKSVDDVVEQGEVVAVLRK
CVEGSDLPNMLLYGPPGTGKTSTILAAARQIFGDMFRERILELNASDERGINVVRTKIKN
FAQLTASGTRPDGRPCPPFKIIILDEADSMTHAAQAALRRTMEKQSRSTRFCLVCNYVSR
IIEPITSRCTKFRFKSLGETQIIERLRHICQLEGVTIEEDAYKAIVDISGGDMRRAITTL
QSCYRLKGAQHKIECSDLMEMSGIIPNSYLQEYLEVCRSGNYTKLEDFVRNIAYEAYSIG
QMLEQFNEYILRCETLTDMQKAHICDKLGECSFRLQDGGSEYLQIMDLGCAIILALQGK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcattccttaaaactggcaaaactaccacaaccgataggagtcaagctagcact
tctacagggcaacaatcgggtgaacggcgaaaaccaccagcaccctgggtagaaaaatac
cgccctaaaagtgttgacgatgtagtggaacaaggtgaggtggtagctgtgctacgtaaa
tgtgtggagggatctgatttaccaaatatgctgttgtatggtccacccggtaccggaaaa
actagtactattcttgcagctgccagacaaatttttggcgacatgtttcgcgaaagaatt
ttagagttgaatgcatccgatgagagaggcattaatgtggtgagaacaaaaattaaaaat
tttgcccaactcacggcgagtggcacaagaccagatggccgcccttgtccacccttcaaa
attatcatactcgatgaggcggactccatgacccatgccgcccaggcggctttaagaaga
actatggaaaagcagagtcgtagcactagattctgtttggtgtgcaactatgtttcgcgc
atcattgaacccatcacctccagatgtaccaaatttcgttttaagtctttgggagaaact
caaattattgaacgccttaggcatatttgccagctggagggtgttactattgaagaagac
gcctacaaagccatagttgacatatcgggtggtgatatgagacgtgccattaccacgctg
cagtcttgctaccgtttgaagggggcccaacacaagattgaatgtagtgatttaatggaa
atgtctggcattatacccaactcttatctgcaagaatatttagaagtatgccgttcgggt
aactatacaaagttggaggatttcgtgcgcaatattgcctatgaggcttatagtattggt
caaatgttggagcagtttaacgaatatatattaagatgtgaaactttgacggacatgcaa
aaggctcatatatgcgataagctgggggaatgttccttccgcttgcaagatggtggctca
gagtatttacaaattatggatttgggttgtgccattatattggctttgcaaggaaagtaa
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