Calliphora vicina (urban bluebottle blowfly): 135949383
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Entry
135949383 CDS
T10781
Symbol
Snr1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03082
ATP-dependent chromatin remodeling
cvj03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
cvj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135949383 (Snr1)
Transcription machinery [BR:
cvj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135949383 (Snr1)
SWI/SNF complex
135949383 (Snr1)
Chromosome and associated proteins [BR:
cvj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135949383 (Snr1)
PBAF complex
135949383 (Snr1)
SWI/SNF complex
135949383 (Snr1)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135949383
NCBI-ProteinID:
XP_065355000
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Position
1:9352795..9354147
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AA seq
370 aa
AA seq
DB search
MSLQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRLFRGILYKKYPGMTRIVLSNEERKRLA
DSGLSPHILASSVSLLRACEVDDIIQGNDEKYRAISVNTTDAPLPRESKSKKQPQYVPTM
PNSSHLDAVPQATPINRNRVHTKKVRTFPMCFDDTDPTANLENASQKECLVPIRLDMELE
GQKLRDTFTWNKNESMITPEQFAEVLCDDLDLNPIPFVPAIAQAIRQQIEAFPSEPPIIE
DSCDQRVIVKLNIHVGNTSLVDQIEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSI
RGQLSWHCRTYAFSEAPLSTVDVPFRNPSDADAWAPFLETLTDAEMEKKIRDQDRNTRRM
RRLANTTTGW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcaaacctatggagataagccggtggcttttcaactggaggagggaggagaa
tattattatgtgggttcagaagttggtaattatatgcgactctttcgtggtatattgtat
aaaaaataccccggcatgacgagaattgtgttgtcaaatgaagaacgcaaacgcttagca
gattccggcttaagtccacatattttagccagttccgtgtcactgctcagggcttgtgag
gtggatgatataatacaaggcaatgatgaaaaatatcgagccatttcggtaaataccaca
gatgctccattgccacgtgaaagtaagtcgaagaaacaaccccaatatgtgcccacaatg
ccaaactcgagtcatttggatgcggtaccacaggccactcccataaatcgtaatagagta
cataccaagaaagttcgtacatttccaatgtgctttgatgatacagatcccacagctaat
ttggaaaatgcatcacaaaaggaatgtctggttcccatacgtttggacatggagttggag
ggccagaagctacgagacactttcacttggaacaaaaacgaaagcatgattacacccgaa
caatttgccgaagttctatgtgatgatttggacttgaatccaattccatttgttccagct
attgcccaggcaattcgtcagcaaatcgaggcatttcccagtgagccgccgataatagag
gacagttgtgatcagcgggttattgtaaagctaaacatacacgttggaaatacttcttta
gtggatcaaattgaatgggatatgtcagaaaagaataataatcccgaggagtttgctatc
aaactttgtgctgaattgggtcttggtggtgaatttgtaaccgccatagcatacagtatt
cgtggtcaattgtcatggcattgtcgtacttatgcatttagtgaagcaccactttccaca
gttgatgtaccatttcgtaatccaagtgatgccgatgcttgggcaccatttttggagact
ttaacagatgccgaaatggaaaagaaaatacgtgatcaggatcgtaacactaggcgtatg
cgacgtttggctaatacaactacgggttggtaa
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