KEGG   Calliphora vicina (urban bluebottle blowfly): 135950023
Entry
135950023         CDS       T10781                                 
Symbol
RpII33
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
cvj  Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03020  RNA polymerase
cvj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135950023 (RpII33)
  09124 Replication and repair
   03420 Nucleotide excision repair
    135950023 (RpII33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvj03021]
    135950023 (RpII33)
   03400 DNA repair and recombination proteins [BR:cvj03400]
    135950023 (RpII33)
Transcription machinery [BR:cvj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     135950023 (RpII33)
DNA repair and recombination proteins [BR:cvj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135950023 (RpII33)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 135950023
NCBI-ProteinID: XP_065355583
LinkDB
Position
2:115679840..115680850
AA seq 275 aa
MPYANQPSVTITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDEVVERLQYTRDCICLDFCPECSVEFTLDVKCSEESTRHVTTADL
KSSNPKVLPVTSRHSNDEDNEYGESTDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPT
AGVCFEYDPDNSMRHTLFPKPDEWPKSEHTELEDDQFEAPYNWEAKPNKFFYNVESAGAL
KPENIVIMGVQVLKNKLSNLQTQLSHENQNDALAV
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccctacgctaatcaaccatctgtcaccatcaccgaactaacagatgataatgtcaaa
tttgttttagaagataccgaactcagcgtggctaatagtttgcggcgtgtttttatagct
gagacaccaacattggcgatagattgggtacagttggaagccaattcaacagtgttgtct
gatgaatttctcgcccatcgtattggtttgatacccttgatatctgatgaagttgtagag
cgcttgcagtatacaagagattgtatttgtttggatttctgtccagagtgcagtgtagag
tttacattggatgtgaaatgttcagaagaatcgactcgtcatgtcacaacagccgatttg
aaatcaagtaacccaaaagttttacccgtaacttcaagacattcaaacgacgaagacaat
gagtatggtgaaagcacggatgaaattttaataattaagttgcgtaaaggacaagaattg
aagttgcgtgcttatgcgaaaaaaggttttggcaaagaacatgccaaatggaatcccaca
gctggtgtatgtttcgaatatgatcccgataactctatgcgtcacactttgtttcctaaa
cccgatgaatggcccaaaagtgaacacactgaattggaggatgatcaattcgaggctccc
tacaattgggaagcaaaacccaataaatttttctacaatgttgaatcggctggtgcttta
aagccggaaaatatagttataatgggagtgcaggttttgaagaataaattgtcaaatcta
caaactcaactcagtcacgagaatcaaaacgatgctttagctgtttaa

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