Calliphora vicina (urban bluebottle blowfly): 135950342
Help
Entry
135950342 CDS
T10781
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03013
Nucleocytoplasmic transport
cvj03015
mRNA surveillance pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135950342 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
135950342 (Hel25E)
03015 mRNA surveillance pathway
135950342 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135950342 (Hel25E)
03041 Spliceosome [BR:
cvj03041
]
135950342 (Hel25E)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135950342 (Hel25E)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135950342 (Hel25E)
Spliceosome [BR:
cvj03041
]
Complex C
Other components
EJC/TREX
135950342 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135950342 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
MoaE
AAA_19
Motif
Other DBs
NCBI-GeneID:
135950342
NCBI-ProteinID:
XP_065355961
LinkDB
All DBs
Position
2:65712875..65719668
Genome browser
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAETQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPTVKVGVFFGGLSIQKDEETLKNVTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatgacgatcttttagactacgaggatgaggaacaaaccgagaccaccgtt
gccgaaacacaagaggcacctaaaaaagatgtaaaaggtacttatgtatctattcatagt
tctggttttcgtgatttcctgttaaagcccgaaattttaagagccattgttgattgtggt
tttgaacatccctcggaagtacaacatgaatgtattcctcaggctgtgctaggcatggat
attctctgccaagctaaatctggtatgggtaaaactgcggtatttgtgctcgccacattg
caacagctggaacccactgagaatgtggtttatgtactagtcatgtgtcacactcgcgaa
cttgcattccaaattagtaaggaatacgaacgtttttccaaatatatgccaactgttaag
gttggtgttttctttggtggtttgtccattcaaaaggatgaagagactttgaaaaatgtt
actcctcatattgttgtcggcacacctggtcgtatattggccctgattcgcaataagaag
ttgaacttgaagcatttaaaacattttattcttgatgaatgtgataaaatgttggaacaa
cttgacatgcgtcgcgatgttcaggagattttccgcagtacaccacatggaaaacaagtt
atgatgttttccgctactttaagcaaagaaattcgaccggtttgcaaaaaattcatgcaa
gatcccatggaagtgtatgtcgatgatgaagccaagttgacgttgcatggtctgcaacag
cattacgtcaaattgaaggaaaatgaaaagaacaaaaaactctttgaacttttggatgta
ttggaattcaatcaagtcgttatttttgtcaagtctgtgcaacgttgtatggctttggca
caattgctaacagaacaaaatttccctgctattggtattcatcgtggtatgacacaggag
gagcgtttaaatcgttatcaacaatttaaggatttccagaagcgcatattagtagctacc
aatttgtttggtcgcggtatggatattgaacgtgtcaatattgtcttcaactatgatatg
cccgaggattccgacacctatttgcatcgtgtggctcgtgctggccgtttcggcaccaaa
ggtttggccattacctttgtttcggatgaagccgacgccaagattttgaacgaagtccaa
gacagatttgatgttaacattaccgaattaccggacgaaatcgatctgtcttcttacatt
gagggacgataa
DBGET
integrated database retrieval system
