Calliphora vicina (urban bluebottle blowfly): 135950353
Help
Entry
135950353 CDS
T10781
Symbol
Chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvj03021
]
135950353 (Chd1)
03036 Chromosome and associated proteins [BR:
cvj03036
]
135950353 (Chd1)
Transcription machinery [BR:
cvj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
135950353 (Chd1)
Chromosome and associated proteins [BR:
cvj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
135950353 (Chd1)
SLIK complex
135950353 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
SLIDE
Ku_C
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
135950353
NCBI-ProteinID:
XP_065355971
LinkDB
All DBs
Position
2:118649354..118666320
Genome browser
AA seq
2086 aa
AA seq
DB search
MSQEHNESFNSIGSEDNDDNREERNGSGSGSGSSSESDSDSDSSSSSSNSSDGHTSPEPP
DREEDDENARDGHLQLQQQQHEREQENHYATQTQNTEAGLPPSAMDAQEDTKTNGYSDEN
ESGSDSGSNSDSNSSNDEDGDEDEEKRKHQAEGGNGGGDDGSDCEARGEEQQHNSNNNTT
AISATTDNNTSHTTNDEDSHNSNDDDDSNSDEEKNHSNSMGKETTTAAPPAATTFESMKN
HSDSDDDASDSGGSSKSSNSSAQSASASSSSSSEDTEEDYQPKRTSARQTRKPAPVERVK
KPVKKKKKNQNWDSEGSDESDGDSEDSTPPRRKPPSSKQIKQQKRSKKPTTSDDSNDEKR
FGTRRAAAAVSYKEASEDDKTDSEDLLEVEYDESQVEAAALAAEEDEKCETIERILAKRQ
GKKGCTGNQTTVYAIEESGCDPNEGVDENDYENTELQYLIKWKGWSYIHNTWESETTLKE
QKVKGMKKLDNFIKKEQEKEYWRRHAGPEDIDYYECQLELQNDLVKSYNSVDRIISRNEK
PEGDSEYLCKWQSLPYAEATWEDTNLVSRKWQHCVDHFNDRENSKCTPSRHCKVLKYRPK
FYKIKIQPEFLHEGLTLRDYQMDGLNWLLHSWCRENSVILADEMGLGKTIQTICFLYSLF
KVHHLYGPFLCVVPLSTMTAWQREFELWAPEMNVVTYLGDVKSREMIRQYEWTFDGSKRL
KFNCILTTYEIVLKDKLFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFETNHRLLITGT
PLQNSLKELWALLHFIMPEKFVTWEDFEVEHGNAADKGYTKLHQQLEPYILRRVKKDVEK
SLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCNHAAL
IRPSEFELMGLQQDEALQTLLRGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILADY
LQKRHFSFQRLDGSIKGEIRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFD
SDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTT
GRTVLDRGSSGPSNNTPFNKDDLSAILKFGAEELFKDEQENDEELVCDIDEILRRAETRN
DDPEMPGDDLLSAFKVASIAAFEEEPDTSTKDNENQAIEEDTKDWDDIIPEDFRRVVEGE
EKAKEMEDLYLPPRRKTAANSQNDTPSRRGGKKGQPEDSNDSDYDMGSDASNDADGKSKS
KRGRPAMKEKIIGFTDTEIRRFIKSYKKFPAPLERLEAIACDAELQEKPLAELKRIGEML
HDRCVQFLEEHKDELAGNAAANKKAVDAAAASTGTEETACKQKRSRATFSVKLGGVSFNA
KTLLSCEEELKPLNGVIPGTAAERLNWSLSIKTRPANFDVEWGDEEDSKLLCGIYQYGIG
SWEQMKMDPSLKLTEKILHNDDRKPQAKHLQSRAEYLLKIIKKNIETKKGGERKQRKPRK
PRESKAAAASTVTHNATPERKTRHVSEAEDALQTGESITATEKKTRKERKESQSKPEAVE
DATSNDVEATHVTSKKKQKAAKEKDPTAKSSAKSKKSSGADSTNKPMHFTANNEPRALEV
LGDLDPNIFNECKEKMRPVKKALKALDRPDSSLSTQDQVKHTRDCLISIGRQIDVCLETY
TKEAEKKEWRSNLWYFVSKFTEFDAKKLFKMYKVASKDSKESSVNKTASPEKNSSKSSLS
PAKKSKDTSLTQNGNEEKNKSVKKKKKDKDKDKDKERDKERDKPKSERFMKIDQGNSKPP
MNKHKPVTGKPGGLTPGSNNSPMKRKRDEIEAAAAGGTPMQGGDMKSMSYKRLNMESGGP
GRNRDERNKQRQRDDYYGGGNSHDGLNTSRGSSSGDRRNSINSPSTPNNRMHSSNPRLPP
GTTSSPYVEGGSGGSGGERWSHSRERYGNSDYKRERYDSYNNRTPGSGGGGYHRDHRDRD
RDRRVDKRRYPPSHPPQHGYPNHYIPPYYNMPPNGVVPPGMGGPHGSYSGGGRGGNTGDP
RYHGDWSREYPPENYRRGGGGNAPPGVNNSNTPNAEYDRRPPPPQT
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggaacacaatgaatcctttaacagtataggatcggaagataatgatgataac
cgcgaagaacgtaatggttcaggaagtggtagcggtagttcttcagaatccgattccgat
tcagacagttcatcatcatcctcaaattccagtgacggtcacacatcacctgaaccaccc
gatcgagaagaagacgatgaaaatgcaagagatggccatctgcagctgcagcagcagcag
cacgagagggaacaagaaaaccattatgctacacaaacgcaaaacacagaagcgggactt
ccaccatcagccatggatgcacaagaagatacaaagaccaatggctattccgatgaaaat
gaaagtggcagcgacagtggtagcaactcagattccaattcatcgaacgatgaagatggt
gatgaagatgaggagaaaagaaaacatcaggcggaaggcggcaatggcggcggcgacgac
ggcagtgattgtgaagcaagaggagaagagcagcaacacaatagtaacaataatacaacc
gcaatatctgctaccacagataacaatacatcacatacaaccaatgatgaagattcccac
aattcaaatgatgacgacgattccaatagtgacgaagagaaaaatcactcaaactctatg
ggtaaagagacgacgacggcggcgccgccggctgcgacgacgtttgaatccatgaaaaat
cacagtgattctgatgatgatgcatctgattcaggaggatcttcaaaatcatctaactct
tctgctcaatcagcctcggcatccagtagcagtagtagtgaagatactgaagaagattat
caacctaaaagaacttctgctcgtcaaactcgtaaaccagcacctgtcgaaagagtaaaa
aaaccagtgaaaaagaagaagaaaaaccaaaattgggattcggagggaagtgatgagagc
gatggcgatagtgaagattcaacgccgcctagacgaaagccaccctcatctaaacaaatt
aaacaacaaaaacgcagtaaaaaacccaccacctctgatgatagtaatgacgagaaaagg
ttcggaactcgtcgggcagcggctgcggtaagctataaggaagcttcggaagatgacaaa
acagactctgaagatttactagaagtggaatatgacgaaagccaagtagaagcagctgct
ctagcggcagaggaagatgaaaagtgcgaaaccatagaacgcattttagcgaaacgtcag
ggcaaaaagggttgcaccggcaatcaaactaccgtatacgcaatagaagaaagcggctgt
gatcccaatgaaggtgttgatgaaaatgattatgaaaataccgaattacaatatctaatc
aaatggaagggctggtcttacatacacaacacctgggaatctgaaacaacacttaaggaa
cagaaggtcaaaggcatgaaaaaattggataatttcattaaaaaagaacaggaaaaagag
tactggaggcggcatgcaggtccagaagacattgactactacgagtgtcaattggaattg
caaaatgatctagttaagtcgtacaatagtgttgatcgcatcatatcacgcaatgaaaaa
cctgagggtgacagcgaatacctatgcaaatggcaatcactgccctatgccgaagccact
tgggaagatactaatttggtttcgcggaaatggcaacattgcgttgatcatttcaatgat
cgtgaaaattctaaatgtacaccatcacggcattgcaaagttctcaaatatcgtccaaag
ttttataaaataaaaattcaacccgaatttttacatgaaggtctaacacttcgagattat
caaatggatggtttaaattggcttttgcattcatggtgtagagagaactctgtcattttg
gccgatgaaatgggtctgggtaaaacgatacaaacaatttgctttttgtattccctattt
aaagtacatcatttatatggtccattcctgtgtgtggtgccactctcaacaatgactgct
tggcagcgtgaatttgaactgtgggctcccgaaatgaatgtggtgacttatttgggtgat
gttaaatctcgagaaatgatacgtcaatatgaatggacatttgatggttcgaaaagactg
aaatttaattgtattctcaccacatatgagattgtgttgaaggataaattatttctgggt
acattgcaatgggcagcattgcttgtcgatgaggctcatcgtttaaaaaacgatgattct
ctactttacaaatcgctcaaagagtttgaaaccaatcatagattactaattacgggtaca
ccactacaaaattcacttaaagaactttgggctcttctgcattttataatgcctgagaaa
ttcgtgacatgggaggattttgaagtggaacacggtaatgctgccgacaaaggctacact
aaactccatcaacaattggaaccgtacatcttgagacgtgttaagaaggatgttgaaaaa
tctctaccggccaaagttgaacaaattctgcgcgttgaaatgacttcattgcagaaacaa
tactacaaatggatactcacaaagaattttgatgccttacgcaagggcaaaaaaggatcg
acctcaacatttttgaatattgtcatagagttaaagaaatgctgtaatcatgccgcccta
ataagaccttcagaatttgaactgatgggtctgcaacaggatgaagctctgcaaacactg
ctgagaggttcgggcaaacttgtgctcttggataagttgctgtgtcgccttaaggagacg
ggccatagagtattgatattttctcaaatggtgcgtatgttagacatattggcggactat
ttacaaaagcgtcacttttcattccaacgtttggatggcagcataaagggagaaatacgc
aaacaagctttagatcatttcaatgccgaaggttcacaagatttttgtttcctactttcg
acaagagcaggaggtttgggtatcaacttggctacagccgacactgtgatcatttttgat
tcggattggaatccacaaaacgatttacaagctcaggcacgtgcccatcgtataggacaa
aaaaatcaagtgaatatctatcgtttggtaacagctcgttcagtggaagaacagattgtg
gaaagagccaaacaaaaaatggtcttagatcatttggttatacaacgtatggataccaca
gggcgcacagttttagatagaggtagttcgggtccttccaacaatactcccttcaataag
gacgatctctcggctatattaaagtttggtgctgaagaattgtttaaggatgagcaagaa
aacgacgaggaactagtatgtgatatagatgaaattctgcgaagagcagagacgcgcaat
gatgatcccgaaatgccgggcgacgatctgctatctgcatttaaggtggctagtatagca
gcatttgaagaagaacccgacacctctaccaaggacaatgaaaatcaggccatagaagaa
gatacaaaagattgggatgatattattcccgaagatttccgtagagttgtcgaaggtgaa
gaaaaagccaaggaaatggaggacttgtatttgccacccagaagaaagactgctgcaaac
agtcaaaatgacacacccagtagaagaggtggcaaaaagggacagccggaagattctaac
gactctgattatgacatgggctcggacgctagcaacgatgctgatggaaaatcgaaatcc
aaacgtggtagaccagcaatgaaagaaaaaattattggttttactgataccgaaattaga
cgttttataaaatcctataaaaaattccctgctcccctggaacggctagaagctatagct
tgtgatgctgagttgcaagaaaagcctttggctgaactcaaacgcataggcgaaatgctg
cacgatcgttgtgtacaatttttggaagaacataaggacgaattggctggtaatgcggcc
gctaataagaaagcagttgatgctgctgcagcttcgactggaactgaagaaacagcttgt
aaacaaaaacgtagtagagctacattttccgttaaattgggtggagtttcgtttaatgct
aaaacccttttgtcatgcgaagaagaactcaaaccgctaaacggtgttatacctggcact
gctgccgaaagactgaattggtcactgagcattaaaacacgacccgccaatttcgatgtt
gaatggggagacgaagaagattctaaactactatgtggtatctatcaatatggcataggt
tcatgggaacaaatgaaaatggatcctagtctcaagttaacagaaaaaattctgcacaat
gatgatcgtaaaccacaagcgaaacatttgcaatctagagcggaatacctacttaagatc
ataaagaaaaacattgaaaccaaaaaaggaggagaacgcaagcaacgtaaacccagaaag
ccaagagaatcaaaagcagcagcagcatccactgtaacacataatgccacacccgaacgt
aagactcgtcacgtttctgaagcggaagacgcattgcaaactggtgaaagcattacggct
actgagaaaaagacacgcaaggaaagaaaagaaagtcaatcgaaacctgaggctgttgaa
gatgcaacgtctaatgatgtggaagccacacatgtcacaagcaagaagaaacaaaaagct
gctaaagaaaaggatcctacagcaaaatcctcggccaaatctaagaaatcatccggtgcg
gattcgacaaataaacccatgcattttacggcgaacaatgaaccaagagccttggaggtt
ttgggcgatttagatcccaacatattcaacgaatgtaaagaaaaaatgagaccagttaaa
aaggccctcaaagctttggatcgtccagattccagtctttctactcaagatcaagtgaaa
cacacaagagattgtttaatatccataggaaggcaaatagacgtttgtcttgaaacctac
accaaagaagcggagaagaaagagtggcgttccaatctttggtattttgtctccaaattt
acagaatttgacgcaaaaaaacttttcaaaatgtacaaagttgcatcgaaagattctaag
gaatctagtgttaataaaactgccagtccggagaaaaactctagtaaatcctcactatcg
cccgctaagaaatctaaagatacatccttaacacaaaatggcaatgaagagaagaacaaa
tccgttaaaaagaagaaaaaggataaagataaagacaaagacaaagaaagggataaagaa
cgcgataaacccaaatctgaaaggtttatgaaaattgaccagggcaatagtaaacctcct
atgaataaacataaaccagtcacgggaaagcctgggggtctaacaccgggtagtaataat
tcacctatgaaacgtaaacgtgatgaaatcgaggctgctgcagcgggtggtacacccatg
caaggtggtgatatgaaatcaatgtcatataaaagactgaatatggagagtggtggtccg
ggaagaaatcgtgatgaacgcaacaaacaacgtcaacgtgatgattactatggtggcggc
aatagtcatgatggtttaaatactagtagaggcagtagtagcggtgatcgtcgcaattca
ataaactcgccatccactccaaataatcgtatgcactctagtaatccacgactaccgccc
ggtactacttcatcaccatatgttgagggcggttctggtggcagcggtggcgagcggtgg
agtcatagtcgggaacggtatggtaattctgattataaacgtgaacgttatgacagctat
aacaaccgtacacctggcagcggcggcggtggttatcatcgtgaccacagagatcgcgat
agggatagacgagtcgataaaagaagatatccaccctcacatccgcctcagcacggttat
ccgaatcattatatacctccgtattataatatgccaccaaatggtgtggtacccccaggc
atgggtggtccccacggcagttatagtggtggtggtagaggaggaaatacaggtgatcct
cgttatcatggtgattggtctcgtgaatatccgccagaaaactacagacgagggggcggt
ggtaacgcaccacctggtgttaacaattctaacactccaaatgccgaatatgatcgtcgt
cctccaccaccacaaacataa
DBGET
integrated database retrieval system
